YALI0C04301g

Overview

Description some similarities with uniprot|Q803T4 Danio rerio dennd6b
Locus type CDS
Locus tag YALI0C04301g

Location

Species Yarrowia lipolytica Positions 576270..578074
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 1805 (nuc.)
Previous locus YALI0C04279g Next locus YALI0C04323g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C04301g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C04301gYALI0C04301g_mRNA-001YALI0C04301g_CDS-001

Nucleotide sequence

 

>YALI0C04301g
ATGGCAAAACGAATCCCATCATCGTTCACCAGCTCATACAAGATCCACGAGAGTCTAGCT
GTGGAGAACCAGCTCGAGATTCCAGAAAAGACTAGACAACTTTTGTCACGCTGGATCACA
TGCTTCCTGGTGGTCCAGTTCGATGTGGATATAGGTCCTGATCTGAAACTGATTGCACCA
AGGGTCAAGTTTTCGGAACAGGACTTTCATACAATCTGTTTTTCATGTTTGCCTGAAAAG
ACTCCTGTGGAGGGAGAACTAAGAGAAGGTCACGTGTTCAGATACGACGACGCTGAAGGA
ACCACTTTATTTGGATACACCCTGTTCAGTCAAAGGAAAGACCCAGAAAGTCCAAGAGGA
TATACTCAGGAGAGTCTAGTGATAATTTCCGAGCACTACCTGCCCCGATTATTCATCACG
TGCCTCGAGACTGTCGTCACAGAGTCCTACCTAAACACAAATCAGACCATGGTCGACCGT
TACCCGGTTATTGAAACGGCTATTGAACTCATGAGTAAATGGCCCGATCCAGGAGTAGAT
GGAGACGTGGGCTTCTTTGGGGACGTAATTAGTCTAAAATGGGGCACCCACGTCACCCAC
AAGAACGAACGTGTACAAACGAATCACGTGACCCAAACAACCCACATCACAGACACCATT
GTTCCCTTCACTCGGTTTTCTTCTTGGACCCATCTGCTTCCACTTCTTGCAGACGTTTCT
GATCTGTACACACTGTTCGAGGCCGTGCTACTTCAACGTTATGTGACCATCTATGCCTCT
TCACCACACCTCGTGTCTAGTTTGGTCAGCTGTATGCTCGACATGGTCTATCCCATGGTT
TATCCGTATGAACAGGTTCGCGATTACGTGACTATTCACACGCAATCGACTGACCCTACA
ATCAAGATCACGGGGCTTACTAATCCCTTCTTGTTGAAGAAGGAGGCTGCTGACGATTCG
TTGTTAATCTTGTTGAGCACTTTCAACTTGAACAAGAAACTAAAGCCAAGACAAAAGTAC
AAAGGTCAGAAAGAGAACATTCCTAAACCACGTGACCGATCACGAGATATAAAACGGAAG
TCTATCAATTCTCCACGTGAGTCATCACGCGAGTCGCCGCGGAACTCGCTTACTAACGGC
CGCTCTTCACCCGACTCCATTCACAATCCCAAGGTTAGAGACCAGAAACCACGCGAGTCG
ACTTTCTCTCGTTTACGTAACCAGATATCAATGCCGTCCTTGTCTTCGTGGTACGACTCG
TCTCCTCGACAACCATCACCTCCTGTGCAATACGATGAAGATTATCAACTTCGTAATCAG
ACGAAGAAATGTGCACCCAAGTATCTCGTTCCTGATAAGAAGTTTCTGGCTGATATGGTT
GTTCTATTTAACGACAGTCAGGTGACGGACCAGGTGATTGACGAGTACATCACCAACCAT
TTCCAGGCGATTGTGTCTCGTATTTTCAGTCTGCTGTCTCGCTATCTTGTTCCTGTGGAT
GATTCATTCATCTTCTCGTCCCTGGACTTCTACAAGGATCTCACCCATGCTTCTAAAAAC
ACCTACTCTTTGCGGTATGCTGTTTTTGGTAGAGGCGGTTCTTCTACGCCTGTGAGTTCT
GGTGGTCGCAGTGACGAGATTAATCTCATTTGCGAGGAGGAGATGGGACTCAAGTTCAAT
GGCTCTGGAGATGTCAGCAAAGTGGCCTTCTTCAAGGCACTGGTTCAGACTGAGATGTTC
AACAATTGGGTAAACAGAGGGTAGCTACAACTACAGTACTAATACACTAATACACAAATC
ACTTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C04301g_CDS-001

Protein length: 588 aa.
Product: Conserved hypothetical protein

>YALI0C04301g_CDS-001 MAKRIPSSFTSSYKIHESLAVENQLEIPEKTRQLLSRWITCFLVVQFDVDIGPDLKLIAP
RVKFSEQDFHTICFSCLPEKTPVEGELREGHVFRYDDAEGTTLFGYTLFSQRKDPESPRG
YTQESLVIISEHYLPRLFITCLETVVTESYLNTNQTMVDRYPVIETAIELMSKWPDPGVD
GDVGFFGDVISLKWGTHVTHKNERVQTNHVTQTTHITDTIVPFTRFSSWTHLLPLLADVS
DLYTLFEAVLLQRYVTIYASSPHLVSSLVSCMLDMVYPMVYPYEQVRDYVTIHTQSTDPT
IKITGLTNPFLLKKEAADDSLLILLSTFNLNKKLKPRQKYKGQKENIPKPRDRSRDIKRK
SINSPRESSRESPRNSLTNGRSSPDSIHNPKVRDQKPRESTFSRLRNQISMPSLSSWYDS
SPRQPSPPVQYDEDYQLRNQTKKCAPKYLVPDKKFLADMVVLFNDSQVTDQVIDEYITNH
FQAIVSRIFSLLSRYLVPVDDSFIFSSLDFYKDLTHASKNTYSLRYAVFGRGGSSTPVSS
GGRSDEINLICEEEMGLKFNGSGDVSKVAFFKALVQTEMFNNWVNRG*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG