YALI0C04279g

Overview

Description similar to uniprot|Q12303 Saccharomyces cerevisiae YLR121C YPS3 Aspartic protease, attached to the plasma membrane via a glycosylphosphatidylinositol (GPI) anchor
Locus type CDS
Locus tag YALI0C04279g

Location

Species Yarrowia lipolytica Positions 572786..573968
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 1183 (nuc.)
Previous locus YALI0C04257g Next locus YALI0C04301g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C04279g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C04279gYALI0C04279g_mRNA-001YALI0C04279g_CDS-001

Nucleotide sequence

 

>YALI0C04279g
ATGATCTTTAGCAACATTCTCCTTTCTACTGTGGCTGCTGCCGCAGTTATCAACCTGCCC
CTCAAGGCCCGAGACCTCTCGGACGCCCCTGAGATCGCTGCCGAGCTTTTCAAGCGACAA
GCAGGTGTTTTCCACAGCACCCAAACGAAGGGAGACATCTTTTACGAGGCCGAGATCGAG
ATTGGAACCCCTCCCCAGAAGGTCTCCGTCTGCTTCGACACCGGATCCCCCCTTCTGTGG
GTGCCCGGATCTAACTCCACCCAATGCAAGGATAGCTGTAAGGGACGAACCTACGATGTC
AGCAAGTCTTCCTCCTGGCAGTACCAGAAGGAGGGAAAGAATTGGGGTGGAACCGGAAAT
TGGGGTAAGGATACTGTGTCCTACGCCGGACAGACCCTCGAGGACTTCAACGTCTGGGTC
TCCAAGGACAAAATTGCCAACTCCCAGGGTATTTTTGGCCAGTCTATCTCAGACAACAAG
CACGGCTCTTTTATCCAAGGTCTCGCGGACTCTGGAAAGATCTCCCGAGCTGTCTACTCA
CTCAACGCCGAGAAGCCCGTCCTTTTTGCCGACGCCTCTACCAAAGGAGTTGTCACCAAC
GTCTATTATGGAGGTTTCGACAAGGCCAAGTACGAAGGTCCTCTGACCACCATCAACTGC
AGCCACCCGGGTGGCTACGGCATGCCTCTGGGCGGTTTGTCCATTCAGGGAGAGGAAATT
CCCGAGGAGAAGAACAAGCGACAAATTGTTCTTGATACCGGAGGAATCAAGGTCCAGTAC
TCTAACAATACTGTCGAAGCTCTCAGTAAGAAGTTTGGTGGTGAAGGACAGTTCTCTGAG
GGAGCCTGGGAGGTCGGTTGCGACCAGAAGCCCGAAATCACCTACCACTTTGGAGAGACC
AAGATCGACATGCCTCTGTCTGACTACGTCTCCAAGGGCAAGGATGGCAAGTGCCGAATC
AACAAGATCCATCTTTCCGGCAACGATGTCAAGACCTTGCTCACCGGCCCCACCCTGATC
TCTCGGGCTCTGGTCATCTACGACAACGAGCGATCTCAGATCACCATAGCCAAGGCCAAG
TACACCGACGAGACCGATGTTGTTGAGATTACCGGCGACATTCCCGGCGCCGTCCCCTTC
AAGCCTTAGGACTTTTGTAATTATTGAGATTCTCCATATTGAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C04279g_CDS-001

Protein length: 383 aa.
Product: Aspartic protease, putative

>YALI0C04279g_CDS-001 MIFSNILLSTVAAAAVINLPLKARDLSDAPEIAAELFKRQAGVFHSTQTKGDIFYEAEIE
IGTPPQKVSVCFDTGSPLLWVPGSNSTQCKDSCKGRTYDVSKSSSWQYQKEGKNWGGTGN
WGKDTVSYAGQTLEDFNVWVSKDKIANSQGIFGQSISDNKHGSFIQGLADSGKISRAVYS
LNAEKPVLFADASTKGVVTNVYYGGFDKAKYEGPLTTINCSHPGGYGMPLGGLSIQGEEI
PEEKNKRQIVLDTGGIKVQYSNNTVEALSKKFGGEGQFSEGAWEVGCDQKPEITYHFGET
KIDMPLSDYVSKGKDGKCRINKIHLSGNDVKTLLTGPTLISRALVIYDNERSQITIAKAK
YTDETDVVEITGDIPGAVPFKP*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG