YALI0C03872g

Overview

Description highly similar to uniprot|P0C0T4 Saccharomyces cerevisiae YLR333C (ohnolog of YGR027C) RPS31B ribosomal protein
Locus type CDS
Locus tag YALI0C03872g

Location

Species Yarrowia lipolytica Positions 513668..514395
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 728 (nuc.)
Previous locus YALI0C03850g Next locus YALI0C03894g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C03872g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C03872gYALI0C03872g_mRNA-001YALI0C03872g_CDS-001

Nucleotide sequence

 

>YALI0C03872g
AGTGAGTATTCGACAGCGACACAAAAAGACGACAAGGCGAACGACCAGGATGGAATTGCG
TGAACTTGACCACGAAACGACATACGGCATTCACAGATAGATGGGCTCACACGACGACTT
TGAAACACACACACGACTACTCGTGATATTGATCCAATGATAGGAGGGCAAGAGGGACTC
AGTTGGACGTGATGGAGAATAAGAGTGGATCAACCAAGTCTGTGTGTTTGTGTTTTTTGT
TTTTCTGTGTTGCGACGTTCAATGTCATTCGTTCCAAGACGACATTCATTCTTCAGCCGG
TGTTCAATAACTCGTGCTACGCTCCTCGTAACTGAGACTAACCCAGTGCCCCCTAAAGTG
CAGCAGACCAAGGCCGCTAAGGCCGCCGCCGCCATGGCCGGAGGAAAGACCCGAAAGAAG
AAGTGGTCCGCCCAGAAGATGAAGGATAAGGCTCAGCACCACGTTATCCTTGACCAGCCC
CTGTACGACCGAATCTTCAAGGAGGCTGCTACCTTCAAGCTCGTCTCTGTCTCCGTGCTT
GTTGACCGACTCAAGATTGGAGGTTCTCTCGCCCGAGTTGCTCTCCGAGATCTCGAGGCC
AAGGGTATCATCAAGCCCGTTGTCAAGCACTCCAAGCAGTACACTTTCACCCGAACTGCT
GCCGAGTAAATTAGTTATTTTATAGCTGAAAAAAATATGTATTGATAGGATGTGAGACCC
TCAACATA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C03872g_CDS-001

Protein length: 108 aa.
Product: Ribosomal 40S subunit protein S31, putative

>YALI0C03872g_CDS-001 MPPKVQQTKAAKAAAAMAGGKTRKKKWSAQKMKDKAQHHVILDQPLYDRIFKEAATFKLV
SVSVLVDRLKIGGSLARVALRDLEAKGIIKPVVKHSKQYTFTRTAAE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG