YALI0C03542g

Overview

Description similar to uniprot|Q6CBF2 Yarrowia lipolytica YALI0C19360g, protein with a F-box motif
Locus type CDS
Locus tag YALI0C03542g

Location

Species Yarrowia lipolytica Positions 468406..469599
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 1194 (nuc.)
Previous locus YALI0C03520g Next locus YALI0C03564g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C03542g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C03542gYALI0C03542g_mRNA-001YALI0C03542g_CDS-001

Nucleotide sequence

 

>YALI0C03542g
ATGGATACAGTACCGAACGAAATTCTGCTCAACATTTTCCTCTTTTGTGAACTCGAAGCA
GCGGTTCCGCTTAGTCAGACATGTTCGCGAGCCGCCATGATGTGGACTGATCTCGACGCC
ACCGTGATTCGTTGCCGAGTTCTAGAACGGGTCCCCTGGATCACTCTCAACGAGTCTGGA
ACCGGTCTTAGCTCATGGCAAAAGTGCGCTCTAGCAATCGTGGCTCGGACTGAAGCGTCC
CAGAACAAACTGAGAGGATGGAGTTATGTCTATCAAGAGAATGCCAGACGACAGATCACC
CGAGGATCCCGTGACAGCAGATGGAGCCCACCTGTGGCTGCAGAAGAGGTGAAAAAGCAA
CCAGGGGTGATTCATCCAATGAGAGGGCCAAATCCAGAAGAAATCAAGGTCCGGCATCCA
GACGCCTTTTACTCGCCAGTGGTTCTGGATGAGAACGACGTCTTTCTGCACATTTCAGAT
TTGAACGACAAATCGCACCACAACCTGATCAACAAGGGTCTTTGTTCCAGGGATGAAGAT
GGCACTTGGGTGGTCACCAACGAGCATTATCTGCATGAGAACGTCAAAGTCACCCTGCTA
CCAAACAATACTGGGGCTTTCTTGATGGTCTACTACGTTAAACGTCAAGCAGATGACCCG
ATTGAAACAAATTTCAGCTCCCAATTCTACCATCTGACCCCAGAGAGTGTTCCGCCATCC
TCCCTGGATCCCCAAGAGTGGCTCAGCTCTGCTAAACCTATTGGTCCGCCTATCTCGCTG
AAATACCCAGAGCTCAATCTCAGGAGAGTAGTATGCAGCTACAATCAGGTCTACAATGGT
TTCCTCTACGCAATGGTCCGTGTAGGCGAATGGGTTCGGTTCTGGATCGACCTGGGCATT
GTAAACATAGACGGCACTCGTGATTTGGCTGTGAATGCCAATTTTCCAATTCTGGAATGT
TCATTTATTGATCTCACAAACAGAGACCATCGACGGGGATATGTTGAAGATGGACTGGAC
AATTATTTCGTTCTTTCTGGCGAGATTAGCACATGGATTTCAGACCTTCGAACTGGAACC
TCCTATCATGCCCAGACGCCTGAGCAACGACTAGAGCAGCAAACACATGGTATAAGCCCG
TTCTTTTATCAGCATGACAAAGGAAGACCCCATTTTCACACGTGGCGCCTCTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C03542g_CDS-001

Protein length: 398 aa.
Product: Hypothetical protein of a 30-member gene family, conserved in the Yarrowia clade

>YALI0C03542g_CDS-001 MDTVPNEILLNIFLFCELEAAVPLSQTCSRAAMMWTDLDATVIRCRVLERVPWITLNESG
TGLSSWQKCALAIVARTEASQNKLRGWSYVYQENARRQITRGSRDSRWSPPVAAEEVKKQ
PGVIHPMRGPNPEEIKVRHPDAFYSPVVLDENDVFLHISDLNDKSHHNLINKGLCSRDED
GTWVVTNEHYLHENVKVTLLPNNTGAFLMVYYVKRQADDPIETNFSSQFYHLTPESVPPS
SLDPQEWLSSAKPIGPPISLKYPELNLRRVVCSYNQVYNGFLYAMVRVGEWVRFWIDLGI
VNIDGTRDLAVNANFPILECSFIDLTNRDHRRGYVEDGLDNYFVLSGEISTWISDLRTGT
SYHAQTPEQRLEQQTHGISPFFYQHDKGRPHFHTWRL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG