YALI0C03564g

Overview

Description weakly similar to uniprot|E9QXL9 Aspergillus fumigatus HLH transcription factor
Locus type CDS
Locus tag YALI0C03564g

Location

Species Yarrowia lipolytica Positions 471028..472597
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 1570 (nuc.)
Previous locus YALI0C03542g Next locus YALI0C03586g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C03564g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C03564gYALI0C03564g_mRNA-001YALI0C03564g_CDS-001

Nucleotide sequence

 

>YALI0C03564g
ATGGCCGTGGTGTCCCCTACAACCGGCCTGCCCCCCGCTCAAGCGGGCCCTCACCTCCCT
CCAAACACAAACACCGTCACTCACACGACTAACTTTACCCACGTGCGCTCGTGTCCACGT
GTGGAGGTTTTGGGTCGTCAGCGTAGCAATATATATGGTGGCTCCGAGGTGGTTTCTCAC
AATCCACACTCCAGACCGCCTCCACCGCCACCGCCCCCAGGTTACCCACACTACAGCCAA
CACCCCCCAGGCAACTACTACACACACCCTTCTCCTACTACCCCCAACACGGCTTCTCCG
ACCCACTACCGTCCGCACATGTCGTCTCCACACATCCCTTCGCCGCCCCACAGTGGCACG
CTGCACGAGTACAAGAAGACGCTTCCCTCCATTGGCAACATGGTGCCTCCCATGTCGCTT
CCTCCGCCGCTCATTGACTCCAACTCGTCGGATTCGGGGGCCTCGAATCAGAACAAGTTC
CCTCCTCCTCCGGGCAGACGGCGCACCATCATCCACATGAGTCCGCACGTCAACACTGCG
CCCAACAGTAGAAACAACTCCATATCGCGCACCAATTCCATGAGTCGCAGCAACTCCATT
AGTGCCATGAGCTCGCCGGGCCTGCCACCGCTCAACCAGCACCAGCAGGTTTTCAGCGAC
TCGTCTGACGAAGACAAGAAGACCGCCGAGGCACATGAACAACAACATCACCACCAACAA
CATCAACACAGCGAACAGCCCAAGCGAAAGCTGTCGAGCTTGGATCCCCTGGAGGAGGAG
AGCCCGATGATGAACCCCACACACAACAGCCACGTGACCCACATGCCCGGCCACGTGAAC
AAAAAGCCACGACCTGACAAGGAACTCAAAAAGTCGGCCCGCAAAACCGCCCACAGTGCC
ATCGAACGACGACGACGATCGAAAATGAACGAGGAATTCGACTCGCTCAAACAGCTGGTT
CCTGCTTGTAGACAGTCAATAGCGGCTGAAGGGGGCGATGCCGGACTTCACAAGCTCACC
ATCCTTCAGGCTACTGTTGAATACGTGCGATACCTGCAGGCGTGTCTGGATTCTGTCGAA
AACGGACAGCAGATCTACCTCAATGGCCCCGAGCTGCCTGGGAAGAAGGCACGAGGAAGC
ATGAGTTACTCCGGAGGCTCCAATCCCCCATCCAACCTATGTTCTCCTGCCTCTTCCATT
TCAGGAACCCCCATGATGCTTCCTGTAGGCAGCATGAGTCCTCTGGATCGGTTCTCGTTT
GGAACTCCCCAGATTAGCGGCCAGTCTGGCTCTACCCCGAGTATGACCCCTAGTATGACT
CCCAATATGGGACCTACTGCCACCAGTTTCGCTCTACCTGAGTCTGCCATCAAGATTGAG
GACACAAAGTCGTTTGAGGCCAGCCGAACCCTGTTGATGTTGGGTCAGAAGGATAAGGAG
AAGGATCGGGGATTCCTCAAGGTGAGTGATTTGCTCAGTTAGTGTGCGAGAGCTCTCATC
CAAATCATTAACTGGGACCCTCATTCATCATCTAGTATATTAGTTAATTTATTATAGAGA
TTTGTACAAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C03564g_CDS-001

Protein length: 494 aa.
Product: Conserved hypothetical protein

>YALI0C03564g_CDS-001 MAVVSPTTGLPPAQAGPHLPPNTNTVTHTTNFTHVRSCPRVEVLGRQRSNIYGGSEVVSH
NPHSRPPPPPPPPGYPHYSQHPPGNYYTHPSPTTPNTASPTHYRPHMSSPHIPSPPHSGT
LHEYKKTLPSIGNMVPPMSLPPPLIDSNSSDSGASNQNKFPPPPGRRRTIIHMSPHVNTA
PNSRNNSISRTNSMSRSNSISAMSSPGLPPLNQHQQVFSDSSDEDKKTAEAHEQQHHHQQ
HQHSEQPKRKLSSLDPLEEESPMMNPTHNSHVTHMPGHVNKKPRPDKELKKSARKTAHSA
IERRRRSKMNEEFDSLKQLVPACRQSIAAEGGDAGLHKLTILQATVEYVRYLQACLDSVE
NGQQIYLNGPELPGKKARGSMSYSGGSNPPSNLCSPASSISGTPMMLPVGSMSPLDRFSF
GTPQISGQSGSTPSMTPSMTPNMGPTATSFALPESAIKIEDTKSFEASRTLLMLGQKDKE
KDRGFLKVSDLLS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG