YALI0C03520g

Overview

Description similar to uniprot|Q9UT85 Schizosaccharomyces pombe WD repeat protein
Locus type CDS
Locus tag YALI0C03520g

Location

Species Yarrowia lipolytica Positions 465956..467785
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 1830 (nuc.)
Previous locus YALI0C03498t Next locus YALI0C03542g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C03520g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C03520gYALI0C03520g_mRNA-001YALI0C03520g_CDS-001

Nucleotide sequence

 

>YALI0C03520g
ATGAATGGAAATGGACGGCAACCGGTCACGTACCGCGGCTACAACACGACCGAAATGACC
CGTCTGTTGCTGCAGGCGCTGGGCGACCTGGGATACAAAGCCACCGCAGAGACGCTGGAA
AGCGAGAGCAACATTTCGTTGGAATCCCCTCACGTTGCCCAGCTTCGTCAGGCCGTCACT
TCCGGTCAATGGGATGATGCCGAGCGCTACTTTGATGGGGTGACTCTCAGAAGCGGTACA
AACCCGGCAGAGTACCGCTTTCTGATTCGCAAACAACACTGTCTGGAACTTCTGGCCCAG
GGCGACGATAAGGGAGGATTGAGGGTGCTTAGAGAAGAGCTAGCACCTCTAGGCGTCAAC
ACACACGAACTTGCCGTTCTGTCCAACCATGTGTTCGAAACAAGAGAAACAGTGCTGCGA
CTTCTCGACGGTGACGCTGCCAAGTCGCGGGTGGCGCTACTAACACAGCTGCAGGCTTTC
ATAGCCCCCTCGGAAATGATCCCCGAGTACCGCCTGGCAACATTGCTGTCCCAGGCCCAG
CAGCATCAGGTTGCTAAGGCTGCCCCTTATCACATGGTACCCCAGCAGCAAATGTCTCTT
TTCGAAGACTACAAGGGCCAACCGGATTTGTTTCCCGACAGAGTTAGCCATGTGTTGGAG
GGTCATTCGCACGAGGTTTGGAATCTTGAGTTCTCGCACTGCGGCAAGTTCTTGGCCTCA
GTGTCGTGTGACAAGTCTATCATCATCTGGAATTTGGACACATATACAGCCGAGAAACGT
CTTCAAGGACACTCTTCCGCCCCAGTGATGGCACTCTGGTCTCCTGACGACTCAATGATC
TTGTCCGGAAGTCAAGACAAGACTGCCCGTCTGTGGAATGCCAAGACTGGTGAGCAGATT
CACGTCTTTGAGGGAATTCATGCACACACCGTTTCCTGCGCATGGCTGCCTGATGGCAAA
CGGTTCATCACGTCGTGTGCCGACGATGCTACCATGATTTTGTGGTCAGCAGAAGACTGT
ACCGAGGTGCATCGATGGAAGTACAAGGCCATTCATGCGGCCGTTTCGCCCGATGGAAAG
CGGCTGGTGGCAGTGGGAGGACCCGGTCCGGCGCACAACTTTGTTGTTTTCGATCTCGTC
ACGTTTGAGGAGGTTGCGGAAGTTGCCACGTCCCAGAAAACCACCTCTGTGAGCATTTCA
GCCGACTCCCGGTACGCCCTAATAAACTTCATGGGCCCCAAGACCGGCGATGGGGTACAT
GAGCTGCAGCTGTGGGACATTTGCAAGCTCAGACTGTGCCAACGGTACATTGGCAACAGT
CCCAGTGGATGTGTGATTCGATCGTGTTTCGGAGGAATCGACGACTCATTGGTGTTGAGT
GGATCCGAGGACTCGAGAGTGTACGTGTGGAACCGCGCAGATGCGAATCTCATTGCCATT
CTGCAGGGTCATTCATCTCTCGTCAACTGTGTGCAGTGGCATCCCACTAGGCCCATGTTT
GCGTCAGCTGGGGATGATCACACTGTCAGAATTTGGGATAAAGAGCAGTGAGAAGACATG
ATATGAAGCTGTGACATGTAGAATCGTTGAGTTGTGGCAGTGGGCACGTCAAGCAGACTC
TACCAACAGTACAGCGAACTGACCCGTAATGACCGTTCACAAGAGTGCATGAGTAACGAA
TAAATGAGTATTGATGAGCGGTGTATGTATTTTTCACTCCGGACCTTCTTGCCTTATCAA
TGTCTATCATTGAGATTATCAGGCATAAGGTCGCATTATCTCGACTTTGAGGAAATACAG
TATGTAGATGTATTGCATTGAATTATGTTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C03520g_CDS-001

Protein length: 517 aa.
Product: WD repeat protein, putative

>YALI0C03520g_CDS-001 MNGNGRQPVTYRGYNTTEMTRLLLQALGDLGYKATAETLESESNISLESPHVAQLRQAVT
SGQWDDAERYFDGVTLRSGTNPAEYRFLIRKQHCLELLAQGDDKGGLRVLREELAPLGVN
THELAVLSNHVFETRETVLRLLDGDAAKSRVALLTQLQAFIAPSEMIPEYRLATLLSQAQ
QHQVAKAAPYHMVPQQQMSLFEDYKGQPDLFPDRVSHVLEGHSHEVWNLEFSHCGKFLAS
VSCDKSIIIWNLDTYTAEKRLQGHSSAPVMALWSPDDSMILSGSQDKTARLWNAKTGEQI
HVFEGIHAHTVSCAWLPDGKRFITSCADDATMILWSAEDCTEVHRWKYKAIHAAVSPDGK
RLVAVGGPGPAHNFVVFDLVTFEEVAEVATSQKTTSVSISADSRYALINFMGPKTGDGVH
ELQLWDICKLRLCQRYIGNSPSGCVIRSCFGGIDDSLVLSGSEDSRVYVWNRADANLIAI
LQGHSSLVNCVQWHPTRPMFASAGDDHTVRIWDKEQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG