YALI0B21912g

Overview

Description weakly similar to uniprot|E3KK50 Puccinia graminis hypothetical protein PGTG_10834
Locus type CDS
Locus tag YALI0B21912g

Location

Species Yarrowia lipolytica Positions 2873107..2873811
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 705 (nuc.)
Previous locus YALI0B21890g Next locus YALI0B21925g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B21912g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B21912gYALI0B21912g_mRNA-001YALI0B21912g_CDS-001

Nucleotide sequence

 

>YALI0B21912g
ATGTTCACTCACTCGCTATTCAAGACCGATACGGTCTACATCTACCAGATTCCGCCACTC
AAGAGCGCCAAGGCCGGCTACCTCAGCGCAGATTGGCCACTCGAAAGCCCCATCTGGACT
GGCAGCCTGGAGGTGGTGGAAACGGAGGTGCAAAACAAGGAGGAGACCAACAATGTCGAG
TGCTCGATTGTGCTCAAGGACACAAAGACAGACGAAATTTTTGCCCAGGCACCATACCAC
GTGGACGGCAGTGGTCTGACGCCTGTGTCTGACTCATCTCGATATCACGCCATTCGAGTC
CAGGGAGAAGGAGGCCAGACAGCTATTTTGGGACTCGGGTTTCCAGACCGATCGGCAGGG
TTCGACTTCAACGTGGCATTACAGGACTTCCGGAAACATGCCACACCAATTGAGGTGTCC
AAAAAGAGCTACAAGTTGCCCGACAAGGTGGTTGACGAACCGGCTGCAGACGTGGCTATT
CCTATTCTAGCTCCTCCGCCAAGGAGAGCCACTATGGAGGAGGAAGAGGAAGAGGAGGAA
GAGGATGACGACGACTTTGGAGATTTTGTCGGAGATAATCAATAGTCGGTCGCTGGTGTC
AAGCCAACATTCGTTGAATAATAAGCACATCTGACTGGCTGCCTTAACAGCGGGCTGTTA
TATATAATGAATTACGATACTGAGAATATGATTTCAAATCAGGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B21912g_CDS-001

Protein length: 195 aa.
Product: Conserved hypothetical protein

>YALI0B21912g_CDS-001 MFTHSLFKTDTVYIYQIPPLKSAKAGYLSADWPLESPIWTGSLEVVETEVQNKEETNNVE
CSIVLKDTKTDEIFAQAPYHVDGSGLTPVSDSSRYHAIRVQGEGGQTAILGLGFPDRSAG
FDFNVALQDFRKHATPIEVSKKSYKLPDKVVDEPAADVAIPILAPPPRRATMEEEEEEEE
EDDDDFGDFVGDNQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG