YALI0B21890g

Overview

Description weakly similar to uniprot|B2WHK2 Pyrenophora tritici-repentis PTRG_09461 conserved hypothetical protein
Locus type CDS
Locus tag YALI0B21890g

Location

Species Yarrowia lipolytica Positions 2871401..2872681
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 1281 (nuc.)
Previous locus YALI0B21879t Next locus YALI0B21912g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B21890g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B21890gYALI0B21890g_mRNA-001YALI0B21890g_CDS-001

Nucleotide sequence

 

>YALI0B21890g
ATGAACACCCAGGTCAGTCTGTACGACGAAGAGCTGAGGATCGTCTCCATCTCGTGGGAC
GTGTATCCACTGCTGTCGTCAGCCGTGACTCAGCTGATCCTCAAGACCCACAAATCAAAG
TCTCCATCTCCACTGGTGCCTTCTTCATCTGCCCACCATCACATGAACCTGGAAGACTCT
GTGTCGTCCACAGCGTCGTCCCAGTGCCATTCCCGCCACTCGTCCGTGTCCATGTCGTCG
CTAGAGAGCACAGAGCCGTTTCTGAACGTGTCTTTCACCCCAGTCGAATGCTCTCTCATC
ATTGCTGATTCGATAATGGAAGAACTGCTCACACCCTTGCTCAACATGCTGGACACAAAG
ACAAGGGACGAGGTAAGAGTTTCACGTGAAATGTACGTGGCCATCCAGGTTGACGGAGAC
GGACTCGACAACGGAGGAAGGGTGGTGGATCTGACTGCCCCCTTGTCTAAGGCAGGTATC
CCCATCTTCTTCCTCACCACATATTTCTCCGACTTTGTCATGGTGCCGCTGTCGGCACGG
TCACGGGTGGTTCAGGCGCTTGAAGAGCGTGGTTTCTTCTTCAACAACATGAACAACTCA
TATGTGTCCATCACAAACCTCAACCACAGCAAGTTGACCAGTGCGCTCATGCCTCTGGCC
GAGCCGCACACCGAGGCCGACCGAACTATCACAGAGGCATCACTTTCAATGGCTTCGTCG
TCGCTGTTTGCCTCCCTTAAGGTCTCGCCTCAATTCTACGACCATACAAAGGTAGTTCTC
GTGGGAGCCCGACACAAGCGAGTGGAAGACAATGAGCTGCTGTTCTTCAAAATATCCAAA
ATGCTGCTCAACCCTCCAAAGTTCTTCAGCATCTCTGTGGGACCAGACGGAGAAATGTCT
TTACTACTTGAAAGCAAAGACACGGGCTCATTTTCGCCCATGGACGTGGTGGGATCCATG
GACGAATACATGATTCCCACCTGTTTCGATCTGTCCCATCTGCCCGAAGACGCCACCGGT
ATTGTGGCTGGTGTGGCCTCTTGTCTGGTAGATGAGCCGATCCAGATGGGCTATCTCAGT
ACTGCTCAAAGTGGTATTGTCATGGTAGCCGAGGAGGACTTGGCGTATGCCAAACGAGTT
CTGGGCGGTCGCAGTGGATCTGCCAGTCCCGCTTAAGAGTCTTGCCGCTTGAAGAGGACT
TCAGAGATGTCACGTTACTGCGGACCATCAGCTGTATCTACAGCATGTACATTAAAATAT
TTATTTGGGTTATTTTGAGCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B21890g_CDS-001

Protein length: 392 aa.
Product: Conserved hypothetical protein

>YALI0B21890g_CDS-001 MNTQVSLYDEELRIVSISWDVYPLLSSAVTQLILKTHKSKSPSPLVPSSSAHHHMNLEDS
VSSTASSQCHSRHSSVSMSSLESTEPFLNVSFTPVECSLIIADSIMEELLTPLLNMLDTK
TRDEVRVSREMYVAIQVDGDGLDNGGRVVDLTAPLSKAGIPIFFLTTYFSDFVMVPLSAR
SRVVQALEERGFFFNNMNNSYVSITNLNHSKLTSALMPLAEPHTEADRTITEASLSMASS
SLFASLKVSPQFYDHTKVVLVGARHKRVEDNELLFFKISKMLLNPPKFFSISVGPDGEMS
LLLESKDTGSFSPMDVVGSMDEYMIPTCFDLSHLPEDATGIVAGVASCLVDEPIQMGYLS
TAQSGIVMVAEEDLAYAKRVLGGRSGSASPA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG