YALI0B01452g

Overview

Description weakly similar to uniprot|P50874, Saccharomyces cerevisiae YNL261W ORC5 Origin recognition complex subunit 5
Locus type CDS
Locus tag YALI0B01452g

Location

Species Yarrowia lipolytica Positions 241398..242982
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 1585 (nuc.)
Previous locus YALI0B01430g Next locus YALI0B01474g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B01452g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B01452gYALI0B01452g_mRNA-001YALI0B01452g_CDS-001

Nucleotide sequence

 

>YALI0B01452g
ATGCTACCGAAAGATGTGGTTGCCGCCACTCGGCGCCAGGTCTCGTGCAGAGACACGCAG
ATCAAACTTCTCAGCGTCCTGCTCTCAGAGAAGGCCCAGGAAATGCCCCAATCGATACTG
GTGCATGGCGAGCCCTCGACGGGCAAATCGACTGTTCTCAAGCATCTTCTGAAGCAGAGT
TCCATCAACCACTCCATCATTCTCGCAGAACAATGTCTGACGACCCGAATTCTGCTTCAG
CGCACGTTTCGGGCCGTGGTGGAGGACAGCGGCAAGACTCTTGCTGACGACTTTGAGATC
ATCTGTGAGAACGTGACGGCCTTCATGGCGCTGCTGGAACGGTTCAAGGCCCAGTACGAC
TTTACAAAGCCGCACGTGATTGTTCTGGATGGCCTCGACAAATTGCATGAAAACCCCAGT
GAAATCTACCATTGTTTCACCCGACTCAACGAAATGACCAGCATTCGAAACGTGAGTTTC
ATCTTCACCATTTCGACCCTGGAACCAAGGGCGCTCATAACCTCCAGCATCCCGCACGTC
CGCTTCACCAGATACACCAAGGAAGAAGTCGTCACAATTCTCTCAGAGCATGAATTGTGC
AGACTTCCACAAACCATACTGTCTGAAGCAGCTAAGAACGGCACCGAAGAAGAAAAAGAT
GTCCTCTCTCGCCAGTTCTGGGGCTCGTATTGCCAGGTTCTTGTTGACGCCCTTTCTCCT
TACGCCTCCTCGGACGTGAGCCTCTACAAGCAGATTGCACGCCGAATCTGGCCTGTCTAC
GTCGATCCAGTCATCACGGGGTCTGCAGACATGCGCGAAACGGCCAAATTGTACGTCCAG
AGCCAGCACATCTTTTCGTCCGAGTTTGCTGTCGCAGATTCTCTTGTTCAGCCCGGAATG
GAGGAGGCGCTGAAACGCAAACGAAACAATGAGCAGGACTTGACTGGCAGCTACGATCTG
CCCTTGCATTCAAAGTACATCCTTGTGGCGGCATATCTAGCTTCCTACAACCCCGAGCGG
TACGATATCCGGTTTTTTTCCAAGCAAAAGGACGGACGAAAGGGCAGACGAGACACCGGT
CGAAGAAAACGACTGACGCTCAACCCTCGGATGCTGGAGGCTCCTCCGTTTGAGCTGGAG
CGAATGCTTGCGATTCTGCATTCTATTTCACCCGAGGAACAGTTTGGTACTGCTGCTGGA
GTTCAGAGCATGTCTAATATTGATTTGCCGGGCCAGATTGCCACGTTGACGACTCTCAAG
TTGCTGGTGAGAACAAGTGGGGATCCTCTGGACTCGAGAACAAAATGGAAGGTAAATGCT
GGTTGGGGGTTGATTGAGCGACTGGCGAGGGATATCGAGCTACCTATTCATAACTACTTG
TTGGATGAGAATGAGTGAACGCGATCAACTCAGCTCGAGGGGTGAATCAACAAACCTGGA
CGGCAGATAAAACCACGCCCTCACTATGGCAGAATACACAAGTGTTAAAGGAAAATGTTC
TACAATCTACCCCACATATGGCGGTGATAGAGAAACGGCAAACATTGTGGACTTAATGAT
AGACAAATAGAAACCATTCTGATAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B01452g_CDS-001

Protein length: 466 aa.
Product: Conserved hypothetical protein

>YALI0B01452g_CDS-001 MLPKDVVAATRRQVSCRDTQIKLLSVLLSEKAQEMPQSILVHGEPSTGKSTVLKHLLKQS
SINHSIILAEQCLTTRILLQRTFRAVVEDSGKTLADDFEIICENVTAFMALLERFKAQYD
FTKPHVIVLDGLDKLHENPSEIYHCFTRLNEMTSIRNVSFIFTISTLEPRALITSSIPHV
RFTRYTKEEVVTILSEHELCRLPQTILSEAAKNGTEEEKDVLSRQFWGSYCQVLVDALSP
YASSDVSLYKQIARRIWPVYVDPVITGSADMRETAKLYVQSQHIFSSEFAVADSLVQPGM
EEALKRKRNNEQDLTGSYDLPLHSKYILVAAYLASYNPERYDIRFFSKQKDGRKGRRDTG
RRKRLTLNPRMLEAPPFELERMLAILHSISPEEQFGTAAGVQSMSNIDLPGQIATLTTLK
LLVRTSGDPLDSRTKWKVNAGWGLIERLARDIELPIHNYLLDENE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG