YALI0B01430g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0B01430g

Location

Species Yarrowia lipolytica Positions 239488..241426
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 1939 (nuc.)
Previous locus YALI0B01408g Next locus YALI0B01452g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B01430g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B01430gYALI0B01430g_mRNA-001YALI0B01430g_CDS-001

Nucleotide sequence

 

>YALI0B01430g
ATGCACATTTCAGAAGACGTGGCGCGATTGGTGTTGGAACACACCAACGTAGATGACAGT
GTAGCGCTTAGTCAGACCTGTCGGAGCTTCCGGGCGGTATTTTTCGAGCTCGACCGGTTG
ATGACAGACAAGGTGGTCCAATGTTGTCCGTGGATGACGCTAGAGGATGAGGGCGGAGAC
AGAGGCTACGACTCTGAGGGCCGATCGTGGAGACAACGTGCCTTGGTGTGTGCTGCTAGA
AACCGGGCCGCCAACAATGACAAGAATTGGGTCCGGGTAACGTCTGAGCAGGCCCTCAAC
AAGAGCAACTACTCGATTGAGGAGCCGGTCGAGGGCAAGACTGTTGCGAATCCGACCCGA
GAGGAGTTGAAGGGATACAGGGGGACGTTTGGAGATGTGCGATTGCCATTTAAGCACCGC
AGAGCCATTGCTAAGGACGGGGTTGTCTATCTGAGGGAGAGGACATATCCTGAGAATTGT
CTTGACTTTTGTCCCGTCAGTTTGGACCTGAGAGAGTTGACTGTGATCAATCAAGGTGTA
GGTGGTTCTGCAGACGGATCAGGTCGCTCCGCAGATGCAGTTTCTCCACTCAGAGAAGCT
CGTCCGGTTTGCCAGCTTCTGGACTTTGGCAGCGAGAGCAGAGACAGTTTCATCTCTCCC
GTGTCCGGCATCGAAGTTGTTAGTGCCACTCCCACAGATACCGGCAACAGATACCCCGAG
GGGCTGGTGTTCTACGAAAATATCATGTTCATTGACGAGAACGAAACGGTCATGATTGTG
GCAAAACGATGTATAGCGTCCACGAGACATGAGGCGTTTTACGTGTACAAACCGGACGCC
AACATCATCGACAACAAGCTGCAATTCAACTTTAACCACTGGAAACAGACCGCCATGGAC
CCTCTGATGCCTCCCCAGCTCATTCCCAACTCGAGCTATGTTGCTGTGGTGAGAAAGATT
GGAGATTCGAACTGGGCCTGTATCGAGCATGCCAGCAAGAAGGACAAGGATCTCATACAG
CTTATGAAGATGGACACTCGACTTTTCAGCGTCCAGGTGTTCAACGGGTTGCTCCACGTC
TACAAGGGCAACCGGTTGTATCCCATTTGGGTGAATCTTGACGAGAAGCGAAAACTGCTG
TTCAACTACCTATTGCCGGAAGAGAAGGGCCAATACACTCTCTGTGAGGTGAAACCTGTT
CTGAAACGCGGTTGGAAGGCCCCTGGAGGCTGGAAGGTGTCCAGAGCTGTGCCCTGGTTT
GCCAAAGGAGGTAATGGAAGGTACATTACTGTGGGAGATTTCAGAAAGGGAGGAGGTTAT
GTTGTGGCAGACTTCCAGACGGGCGAGTCGTACACAACCCAAGTGCCCTACAGAAACGAT
GGAAAACCCGATTTCGTCTTTCCTTCTCATTCAGTTAATGACAACTCCATCAGCTTCTTT
TCTTGGTCTCAAGTTGTCGGTCGCAAAATTGTGTCGGAACTCGATGAACTCAACGACTCT
GTTGAAGATGGAGATGCCATTGACTGCAAAGAAGAGTCGGTCAAACTTGCAAAGATCTAC
GATGAGCTCATCTCGCCACCTGCCCCGGACTCAGAAAGTGGCTGGGAACAGTGAGATGAA
CAGCGACAATTAGCGACGAATCGAAATGCTGTCTCGACCCCCAGTCGTTCCCACAGACAC
GTACAATATCAGCGACGATTCCAGTTCCAGTTCTAGCGGCGAGTGGGCCCGAGCTACTCT
GGGTAGACGTCATCCGCTGGTCTTTGGGGGGGGGGGAATATTTCTTCTATGAATGATTGT
GTGAGGGAGTCACGTGAGGCACAAATAGCTGGTCTAGGAGTGCACCTCAGCAGCGCTTGT
TCTGTTCTATTCTATTCAGTGTGCAGTCAGCGACTTTATAGTCTACATTTGTATCAGAAT
GGTTTCTATTTGTCTATCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B01430g_CDS-001

Protein length: 538 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0B01430g_CDS-001 MHISEDVARLVLEHTNVDDSVALSQTCRSFRAVFFELDRLMTDKVVQCCPWMTLEDEGGD
RGYDSEGRSWRQRALVCAARNRAANNDKNWVRVTSEQALNKSNYSIEEPVEGKTVANPTR
EELKGYRGTFGDVRLPFKHRRAIAKDGVVYLRERTYPENCLDFCPVSLDLRELTVINQGV
GGSADGSGRSADAVSPLREARPVCQLLDFGSESRDSFISPVSGIEVVSATPTDTGNRYPE
GLVFYENIMFIDENETVMIVAKRCIASTRHEAFYVYKPDANIIDNKLQFNFNHWKQTAMD
PLMPPQLIPNSSYVAVVRKIGDSNWACIEHASKKDKDLIQLMKMDTRLFSVQVFNGLLHV
YKGNRLYPIWVNLDEKRKLLFNYLLPEEKGQYTLCEVKPVLKRGWKAPGGWKVSRAVPWF
AKGGNGRYITVGDFRKGGGYVVADFQTGESYTTQVPYRNDGKPDFVFPSHSVNDNSISFF
SWSQVVGRKIVSELDELNDSVEDGDAIDCKEESVKLAKIYDELISPPAPDSESGWEQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG