YALI0B01474g

Overview

Description similar to uniprot|P28519 Saccharomyces cerevisiae YMR201c RAD14 nucleotide excision repair protein
Locus type CDS
Locus tag YALI0B01474g

Location

Species Yarrowia lipolytica Positions 243662..244542
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 881 (nuc.)
Previous locus YALI0B01452g Next locus YALI0B01496r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B01474g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B01474gYALI0B01474g_mRNA-001YALI0B01474g_CDS-001

Nucleotide sequence

 

>YALI0B01474g
ATGCTGACGGAAGACCAGAAAGAACACCAGCGCCAGAAAGCTCTCAAAAAGTTTGAGGAG
GCCAAGCGCCGAATGGCGGAAAAACGCAAGGCCACAGACGTGCGGGACGCGTCGGCTAAA
CGACACCAAAATAGAGCCATGGGAGCGCCACCCATCACCCGAGCAAGTTATATTGAATAC
GATCTGGCCAACATGAAGGACACACAGGGTGGCTACTTGGATGACGAAGAGGAGGAGGAC
GTTGAAGAGTGGAAGCGGCGACAGGCACAGACATTCGAGGCCGGTCCCATGTCTATCAAT
CCGTCCGAGAACCCTCAATGTGCCGAGTGCAAGAGTTTCGACATTGATCCGCAATTTCAG
TCCGTGTTCAAGCTGCTTGTATGTCGAGCATGTAAGAAGAAGATTCCCGAAAAGTATTCG
TTACTGACTAAGACGGAGGTGAAGAACGACTATCTTTTGACCGAGCCTGAGCTCAGAGAT
AGAGACCTGATTCCCCACTTGGAAAAGCCGAATCCACACAAAAAGACTTACAACAACATG
ATGCTCTATGTGCGCAAACAGGTGGAGGAATTTTCAATCAGGAAATGGGGGTCTTTGGAC
GAACTGGATGCCGAGTATGAGAGACGGGTGGAAATGAAGAAACAGAGAAAGGATAAAAAG
TACTTGGACAAATTGAAGGAGATGAGGAAGAAAACCCGAGCTGAAAACTGGACAAAGACA
ACAGCGAGGGATGTTCATATTCATGATTGGTCTGGTGATATCGGAGACGATCCGGATCAC
GTGAAACGAAGATGTCAGACCTGTGGCATGGAGACCGAGGAGTTGAAAATGTGACATGCT
GTTCAGCTACTAATGTAAATTAATGTAAATAAGTTATTGGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B01474g_CDS-001

Protein length: 278 aa.
Product: Protein that recognizes and binds damaged DNA during NER, putative

>YALI0B01474g_CDS-001 MLTEDQKEHQRQKALKKFEEAKRRMAEKRKATDVRDASAKRHQNRAMGAPPITRASYIEY
DLANMKDTQGGYLDDEEEEDVEEWKRRQAQTFEAGPMSINPSENPQCAECKSFDIDPQFQ
SVFKLLVCRACKKKIPEKYSLLTKTEVKNDYLLTEPELRDRDLIPHLEKPNPHKKTYNNM
MLYVRKQVEEFSIRKWGSLDELDAEYERRVEMKKQRKDKKYLDKLKEMRKKTRAENWTKT
TARDVHIHDWSGDIGDDPDHVKRRCQTCGMETEELKM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG