YALI0F30635g

Overview

Description weakly similar to Yarrowia lipolytica uniprot|Q6CFY1 YALI0B02596g, unknown function
Locus type CDS
Locus tag YALI0F30635g

Location

Species Yarrowia lipolytica Positions 3827272..3828731
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1460 (nuc.)
Previous locus YALI0F30613g Next locus YALI0F30657g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F30635g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F30635gYALI0F30635g_mRNA-001YALI0F30635g_CDS-001

Nucleotide sequence

 

>YALI0F30635g
ATGGCAGCTTCCCTATTGCCAGACGAAATATGGGGCCTTGTGATCCAACATTTGGATTTA
GAATCACTGGTCAACATAGGAGATACCTGTCGTTACTTACATGCCCTGATTGATGACTCA
GAAGCCATATTACGCTCTGCTGTTGCGGATGTTGCACCCTGGGTGGAGCTAGGTGTTGAT
GGCTTGGAAGCCAATACCTGGCGACAATGTGCACGTTTTGTTTTCGAGCAACAAAAACAA
GCACGTGAAGTGCCAAACGAATCTTTCGATGACATTTACTTTGAGGTTCTCGAAGATGCC
AGTTCCAAGCCGTCAAAAGTTCAGTTAATTGATGTGACCACTGTCGACAGGTTACCAGAG
GATTTTGAGCCTATTTTTGAAAAGACGACCATGAAACTTGGAGGAACGGGCGTGGAAGTG
GACATGAAGACGCTCGGGTTCAGTTATATTTCGGAGCCAGAGCACAAGATGTGTGAGCAA
AAGTACGGCGTGGACGTTTATGCCAGTCTGGGGTTTGCGGAGTTCCACTGCTTGGAATAC
AGCAATTCGTCAGAGCTGTTGATTGTGGAAAAGTGCAGCAAGGGGGCATTGATGAAGTGG
AAGGATGGGGTTGTCGATGTTGATAACGCCTACGTATTCCAATTCTTGGGTACATGCAGT
GATGTCCAGGTCTTGCCCAATGCCATGTTGTGTTTAGAGCTCTATGAGGATCATCAAGCG
AGTATCAGTTATGTGGATCATACAAGACGCAAGCAGATACAGGTTTTGGAGTGGATCAGT
GACTATATGTGGTTTATGACATTGCAATATCATGGTTATCTGTGGATTGGTTTTGGAGGA
CATCTGGTGCCATTCTTTTTCGACATCAACAGCACCAAGGTGCGGTTTGTGACTGACAGG
ACGTTGGTGGGAGGATATGAGGAGTTCACGCTTCCAACTCAAGGCAAAGGAGTGTATAAG
CGTTATGTTGCCTACGGTATTACTAACGGTATTTTCTATGACATGGCTTCTGGGGACACG
GTCTGTTATGATGAGCCATCGTTACCCCGTACAGGAAATTTCTTTGCAGGTACATCTCAA
GGCAAACTTCAATTTTTCAGGATATCCCCTGAACGCATCGTCAGTCTCGAAAACCAGTTT
AATGCCAAAAAGGATCATCTTGATGAAGGTGTTTCAAGTCAGTGGTTCTTGTCCTAAGTA
CGTACTTACTGTACTGAAAGTCCGATATGTGGGCTGGATGAGCATCTTGCGGCTCAGGTT
TGCTGTCGAATTGCTGTGGGGTGAGTACCACCAATAACCGAAGAACACTCGAAACATCCG
CATGACCCTCATCCCTGGAGCATAATATTCATCACCAGATGGAGCGAAGTACGCAGGTAT
GCCGATAGCGGCCCCCAGATCAGATCCGATCCCGGCTGTCACCATTCTACCAGAGCATTA
GACTAATAAATCCATGGAAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F30635g_CDS-001

Protein length: 399 aa.
Product: Hypothetical protein of a 30-member gene family, conserved in the Yarrowia clade

>YALI0F30635g_CDS-001 MAASLLPDEIWGLVIQHLDLESLVNIGDTCRYLHALIDDSEAILRSAVADVAPWVELGVD
GLEANTWRQCARFVFEQQKQAREVPNESFDDIYFEVLEDASSKPSKVQLIDVTTVDRLPE
DFEPIFEKTTMKLGGTGVEVDMKTLGFSYISEPEHKMCEQKYGVDVYASLGFAEFHCLEY
SNSSELLIVEKCSKGALMKWKDGVVDVDNAYVFQFLGTCSDVQVLPNAMLCLELYEDHQA
SISYVDHTRRKQIQVLEWISDYMWFMTLQYHGYLWIGFGGHLVPFFFDINSTKVRFVTDR
TLVGGYEEFTLPTQGKGVYKRYVAYGITNGIFYDMASGDTVCYDEPSLPRTGNFFAGTSQ
GKLQFFRISPERIVSLENQFNAKKDHLDEGVSSQWFLS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG