YALI0F30613g

Overview

Description similar to uniprot|Q9P5M9 Schizosaccharomyces pombe putative class II aldolase
Locus type CDS
Locus tag YALI0F30613g

Location

Species Yarrowia lipolytica Positions 3826068..3827035
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 968 (nuc.)
Previous locus YALI0F30591g Next locus YALI0F30635g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F30613g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F30613gYALI0F30613g_mRNA-001YALI0F30613g_CDS-001

Nucleotide sequence

 

>YALI0F30613g
ATGCAAATGTACTTGGTAAGCATCTCTTCTTCAACTTGCACTACAGTACAAGTATTCGTA
CTACAACTACACAACAAAATGAGCCCAGCGGAAGTCGTCCAACCCGAAAACAAATTTGCC
CACGGAGCTCCCCACCCCCACCAGATCCCCAAGATCCAGGGTCTGGAGAAGCGAAAGTGG
ATGCTACAGCACATGGCAGGAGCGTTCCGAATCATGGGCCGAAAGGGATACACTGAGGGA
TCTGCCGGCCACATTTCCATCCGAGACCCCATCGATCCCAACACCTTCTGGATCAACCCT
ATCGGAGTGCACTACAGTCTCATGAAGCCCTCCCACATGGTCCATGTTGATGAAAAGGGT
AACATTCTGAAGGATGGAAACCAGGCGGCAGTGAACACCGCCGGATTCCTGATCCACTCC
GCAATCCACAAGGCCCGTCCCGATGTTGACGCCGCCTGCCATACTCACAGCATTCATGGA
AAGGCCTACTCGGCATTCGGCAAGGAGTTGGAGATGATCAACCAGGACGTCTGTACTTTT
TACAAGGCTCACTCTGTCTACCGCGCCTTCGGTGGAGTTGTTCTGGGCGATGAGGAGGGC
CACAAGATCGCTGAGGCCCTGGGTGACAATATGGCTGTCATTCTGCAGAACCACGGCCTT
CTCACTGTGGGACGAACCGTGGACGAGGCGACATACCTGTTTACCCTGATGGAGCGATCC
TGCGAGGCTCAGATGCTGGCCAACTCTGCCGAATGCAAGGGATTCCAGAAACAGTTCATC
CATGACGAGGAGGCTCAGTTCACCTTTGATAGCAGCTGCGATATGGGCACTCTCTACGCC
GAGATGCAGCCTGACTATGAGTACGAGCTGCACTGTGAGGATTTCCGAGACATGTAAGGT
TCTATCTCACCAGTCACGTATATATTAACATGAGTTTCATTTTGGAGTATGTACCGTACT
CGTACGAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F30613g_CDS-001

Protein length: 299 aa.
Product: Class II aldolase, putative

>YALI0F30613g_CDS-001 MQMYLVSISSSTCTTVQVFVLQLHNKMSPAEVVQPENKFAHGAPHPHQIPKIQGLEKRKW
MLQHMAGAFRIMGRKGYTEGSAGHISIRDPIDPNTFWINPIGVHYSLMKPSHMVHVDEKG
NILKDGNQAAVNTAGFLIHSAIHKARPDVDAACHTHSIHGKAYSAFGKELEMINQDVCTF
YKAHSVYRAFGGVVLGDEEGHKIAEALGDNMAVILQNHGLLTVGRTVDEATYLFTLMERS
CEAQMLANSAECKGFQKQFIHDEEAQFTFDSSCDMGTLYAEMQPDYEYELHCEDFRDM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG