YALI0F30657g

Overview

Description weakly similar to uniprot|C4R796 Komagataella pastoris Nuclear type II J heat shock protein of the E. coli dnaJ family
Locus type CDS
Locus tag YALI0F30657g

Location

Species Yarrowia lipolytica Positions 3828877..3830307
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1431 (nuc.)
Previous locus YALI0F30635g Next locus YALI0F30679g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F30657g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F30657gYALI0F30657g_mRNA-001YALI0F30657g_CDS-001

Nucleotide sequence

 

>YALI0F30657g
ATGAAAGGGCACGTTCGCCACAATCAAACTCACTCGTCAGCAAAAATGCTAGTGCTTTAC
GAGATCCTCAACGTGCCTGTCAACGCCGGTGGCTTCGACATCAGCCAGGCCTATCGCACA
CGATGCTTGCAACTCATCAAGCTTCTGGGCAAGAGCGACGCGTACCTTAGTTTCTACGCC
GTTTCCGACGCCTACCAGATTCTGCGGGTTCCCCAGTACAGAAACAACTACCTGGCCTGC
GGAGATGACCCCAAGTTCTTCGCCGCCTTTGAGCCCCGCTTCATTGATGCCATCGACCTC
TTCACATCGCTGTTTGGCCTCCCACAAATGGAGCCTCTGGTGTGCAACGCCAGTACCAAG
AACCTGAGCGCACAGTCTGCTGTGTTCCAGACGGTTACCAAGATCGAGAAGGAGCTCTAC
GGCAAGCAGAAGTCCAACACTAAGCTGGTCTTGGTCAAGGACAAGCACGTCAAGATGCTG
CGACGAATGGGATGGGATAAGAACAAGGTGAACGAGATGCTGAAGGGAAAGAAGAACGCC
AACTCCCAAGACGCCCTCCAGGCCTCTGTGTCCTTCTACAACTCTCTGATTGACGCAGAC
TTTGCATCAGACGTAGACTCAGACGACTTCTCTCAGGTATTCACATCCAACTTCCAGCAA
CAACTGGCTCCCTTCAGAGAATTGCCCTTTGGTGCCGATTATTGTAAGGCTCTGGGCTCT
GCGTTCGTGACCATATCACAGTCATTCAAGGAAAAGCTCGAACACAGCAGGCTATCGAGC
ATGTTTGGAGGACTGGACACAGACAGCTGGAAGAAACAACACGCTGAACTTGCCATGCGG
CTGGGTGAAGCACGAGACCTGTGCCTTCATGCTGCGGCTTACTGGAGAGACAAGCATATT
TCGGGCACCGATCAGGTGAACCTGTGCTATGCTGCTTGTGTCTACCAGATCATTCTCAAC
ATTTTTGTGCGAGACGCAGTGATCATCGCTCACGACTGTCTTGAGCGAAAGGGCAACCGA
AAAGCCAAACTTCAGCGAGCAAAGCGACTCTGGGCTATTGGTAATTGGATGGTTTCTGCC
CCCGGTACTCCTGTTCCTTACGAGGACACTTTGCATGAGGTTGTCACCATTACTGCGCAG
CTTGAAGCTGGCGTGATTCGACGAAGAACCGATCCCGAGCAGAAAGCTCTGGATTACAGC
ACGGTGATTGATACTCGAGGTCTTTGGGAAACCGGTACCGGAATCGGTGACCCTGGAACT
TTTCTTCCCTACTCACCCACCCTTCATCAAGGAGCTGATTTCTGAGAATAATTGAGGAGA
GAATGGCGCCGAAGACTAAACACATCATACGAATAACAGGGGACGGAGAGAAGAGGATGA
ATTGTACAATAGGAAGTAATTAATAGCTAGTAATAATAAATATTTATGTCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F30657g_CDS-001

Protein length: 435 aa.
Product: Conserved hypothetical protein

>YALI0F30657g_CDS-001 MKGHVRHNQTHSSAKMLVLYEILNVPVNAGGFDISQAYRTRCLQLIKLLGKSDAYLSFYA
VSDAYQILRVPQYRNNYLACGDDPKFFAAFEPRFIDAIDLFTSLFGLPQMEPLVCNASTK
NLSAQSAVFQTVTKIEKELYGKQKSNTKLVLVKDKHVKMLRRMGWDKNKVNEMLKGKKNA
NSQDALQASVSFYNSLIDADFASDVDSDDFSQVFTSNFQQQLAPFRELPFGADYCKALGS
AFVTISQSFKEKLEHSRLSSMFGGLDTDSWKKQHAELAMRLGEARDLCLHAAAYWRDKHI
SGTDQVNLCYAACVYQIILNIFVRDAVIIAHDCLERKGNRKAKLQRAKRLWAIGNWMVSA
PGTPVPYEDTLHEVVTITAQLEAGVIRRRTDPEQKALDYSTVIDTRGLWETGTGIGDPGT
FLPYSPTLHQGADF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG