YALI0F30481g - ERG13

Overview

Description uniprot|Q6BZW0 Yarrowia lipolytica YALI0F30481g ERG13 3-hydroxy-3-methylglutaryl-CoA (HMG-CoA) synthase, putative
Locus type CDS
Gene name ERG13
Locus tag YALI0F30481g

Location

Species Yarrowia lipolytica Positions 3812285..3813692
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1408 (nuc.)
Previous locus YALI0F30459g Next locus YALI0F30503g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F30481g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F30481gYALI0F30481g_mRNA-001YALI0F30481g_CDS-001

Nucleotide sequence

 

>YALI0F30481g
ATGTCGCAACCCCAGAACGTTGGAATCAAAGCCCTCGAGATCTACGTGCCTTCTCGAATT
GTCAACCAGGCTGAGCTCGAGAAGCACGACGGTGTCGCTGCTGGCAAGTACACCATTGGT
CTTGGTCAGACCAACATGGCCTTTGTCGACGACAGAGAGGACATCTATTCCTTTGCCCTG
ACCGCCGTCTCTCGACTGCTCAAGAACAACAACATCGACCCTGCATCTATTGGTCGAATC
GAGGTTGGTACTGAAACCCTTCTGGACAAGTCCAAGTCCGTCAAGTCTGTGCTCATGCAG
CTCTTTGGCGAGAACAGCAACATTGAGGGTGTGGACAACGTCAACGCCTGCTACGGAGGA
ACCAACGCCCTGTTCAACGCTATCAACTGGGTTGAGGGTCGATCTTGGGACGGCCGAAAC
GCCATCGTCGTTGCCGGTGACATTGCCCTCTACGCAAAGGGCGCTGCCCGACCCACCGGA
GGTGCCGGCTGTGTTGCCATGCTCATTGGCCCCGACGCTCCCCTGGTTCTTGACAACGTC
CACGGATCTTACTTCGAGCATGCCTACGATTTCTACAAGCCTGATCTGACCTCCGAGTAC
CCCTATGTTGATGGCCACTACTCCCTGACCTGTTACACAAAGGCCCTCGACAAGGCCTAC
GCTGCCTACAACGCCCGAGCCGAGAAGGTCGGTCTGTTCAAGGACTCCGACAAGAAGGGT
GCTGACCGATTTGACTACTCTGCCTTCCACGTGCCCACCTGCAAGCTTGTCACCAAGTCT
TACGCTCGACTTCTCTACAACGACTACCTCAACGACAAGAGCCTGTACGAGGGCCAGGTC
CCCGAGGAGGTTGCTGCCGTCTCCTACGATGCCTCTCTCACCGACAAGACCGTCGAGAAG
ACCTTCCTTGGTATTGCCAAGGCTCAGTCCGCCGAGCGAATGGCTCCTTCTCTCCAGGGA
CCCACCAACACCGGTAACATGTACACCGCCTCTGTGTACGCTTCTCTCATCTCTCTGCTG
ACTTTTGTCCCCGCTGAGCAGCTGCAGGGCAAGCGAATCTCTCTCTTCTCTTACGGATCT
GGTCTTGCTTCCACTCTTTTCTCTCTGACCGTCAAGGGAGACATTTCTCCCATCGTCAAG
GCCTGCGACTTCAAGGCTAAGCTCGATGACCGATCCACCGAGACTCCCGTCGACTACGAG
GCTGCCACCGATCTCCGAGAGAAGGCCCACCTCAAGAAGAACTTTGAGCCCCAGGGAGAC
ATCAAGCACATCAAGTCTGGCGTCTACTACCTCACCAACATCGATGACATGTTCCGACGA
AAGTACGAGATCAAGCAGTAGATTGTTAAGATGCAACTAGGGAAGGGGAATTAAAATTCA
TATAGCAATAATGTATAATAGCTAGGAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F30481g_CDS-001

Protein length: 447 aa.
Product: 3-hydroxy-3-methylglutaryl-CoA (HMG-CoA) synthase, putative
Gene: ERG13

>YALI0F30481g_CDS-001 MSQPQNVGIKALEIYVPSRIVNQAELEKHDGVAAGKYTIGLGQTNMAFVDDREDIYSFAL
TAVSRLLKNNNIDPASIGRIEVGTETLLDKSKSVKSVLMQLFGENSNIEGVDNVNACYGG
TNALFNAINWVEGRSWDGRNAIVVAGDIALYAKGAARPTGGAGCVAMLIGPDAPLVLDNV
HGSYFEHAYDFYKPDLTSEYPYVDGHYSLTCYTKALDKAYAAYNARAEKVGLFKDSDKKG
ADRFDYSAFHVPTCKLVTKSYARLLYNDYLNDKSLYEGQVPEEVAAVSYDASLTDKTVEK
TFLGIAKAQSAERMAPSLQGPTNTGNMYTASVYASLISLLTFVPAEQLQGKRISLFSYGS
GLASTLFSLTVKGDISPIVKACDFKAKLDDRSTETPVDYEAATDLREKAHLKKNFEPQGD
IKHIKSGVYYLTNIDDMFRRKYEIKQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG