YALI0F30503g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F30503g

Location

Species Yarrowia lipolytica Positions 3814724..3816353
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1630 (nuc.)
Previous locus YALI0F30481g Next locus YALI0F30525g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F30503g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F30503gYALI0F30503g_mRNA-001YALI0F30503g_CDS-001

Nucleotide sequence

 

>YALI0F30503g
ATGACGACGCGTCAACCATACAAACCAAAGTACATTCCGCTATACGCTGCAAGGTCGGAA
AAGAAGGAGACTGAGGCGCCGGCACACAAGCTCGAGCAACAAGACATTTCAGAGCTCAGG
CAGCAGATTGACGACTTTCGAGAAGAAATCAGAACAAGCCCAGTTTCTTACCCCAAAGAA
CCAATGGCAGACCCTCACAGACGATTTGCCATTCCAACAGATTTGTCTCGATTTGAGCGG
CTCCGACGAGGTCTCAGACGCGAAGAGGACGCGGACATTAATCTCGGCGCAAACTACTCG
CGATACAGACTGGAAACCAGAAGGAACGTGGAGGACGACGATGAGGTCCCCGAGACAAGG
ACTACACGCGTCTCCAAGAGAGATCGAGATCACAATGAACTTTCGACGAATCAAACCCGG
CTGCGGAGCAACAGCAGATCTAGAAACCCTCCACAACAATACCTCAACAAATTGCACATA
CAGGGGGAGGAGGAGTTTGAAGACCAGTACGCTGAGATCAAGGAGGAGTCTCACGACGAA
GACACGTCTCTGTATCATCCCATGCCACAGATGCGCCGTTATGCAGGCTACAACGCGTTC
ACAGGATCGCCTCAGAAGAAGGTGACAATTACGGAGCCACAGGAGAAGCCACAGGAGAAG
CATATGAGACCCAGAAGTCGTGATCCGGACACCAGGGCAGAGCATCGAATTCACGAAGCC
ACACGACTGGTGGAGGACAAGCTCGAGCAGTATATGGGTGCCATCGAGGCCAGCAAGGGC
CCAGAGGTGGCTCAGCAGTTTGTGCGAGAGTACGAGCTCATGATGGACCTGCTGAGCAAA
GAGTATCAGGGGTTTAAAGATTTTCAACAAAAGCAACCTACCCAGACCCCTATTTCAAAG
ACTTCACCTAAGTCTGTCTCGAAAACAACACAAAGGTCAGCTTCCAAAAAGGGTATCATC
AAAATGCCGACTCAATCCGCCAGCAGGAGACCTACTGAGGACATTAATGACGATTATGAG
GAGGAACGAGACATTGAACAAGACTACGGAAAGAAACGTCCTCAAGTCAAGATTGAGAAA
CAAGAGGAGGATGCTCGACCTGAGAATGATAGCAGAAGGGCCCAAAAAGGCATGCATGAG
TTAGAAAGGGAAATCACACAGACACCGACCAAATCGCTTGATCCACACACCCCTCAAAAG
GTGGTGATACCCAATACCGGAGTCTGGGCACGAGCCCGGTCTACAATCTCCAGATCCTGT
AGAGCCGTTGTTGGGACCTGGCAAACCACTACATCTCCCCTACTTCTTCTGGCAACCTCG
TTCTTCTTCTGGCAAGCAATTCGATTGTATGTATACGCGACACTTTTCATCATCCCCCCT
TACCTAAACTAACACAGGGCTCTCACCTTTTTCTGCCTGGATGACGACGAGGAGTTTGTG
CGCCAGCAGCTGGTTCAGGGCATGAGCTACGCTGAAATCGAACACATGTGGGGCCTGCGA
GGCTTCAATATATGCGGTGGGGTGTGGAGGCCTCCAGTTCCACAGTAGACACGACACGAC
TAACCGCGCTAGAGACACCATGCCACTCTAACTGTACACTATCTAATAAATAGACTGCTA
ACAATGTTTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F30503g_CDS-001

Protein length: 499 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F30503g_CDS-001 MTTRQPYKPKYIPLYAARSEKKETEAPAHKLEQQDISELRQQIDDFREEIRTSPVSYPKE
PMADPHRRFAIPTDLSRFERLRRGLRREEDADINLGANYSRYRLETRRNVEDDDEVPETR
TTRVSKRDRDHNELSTNQTRLRSNSRSRNPPQQYLNKLHIQGEEEFEDQYAEIKEESHDE
DTSLYHPMPQMRRYAGYNAFTGSPQKKVTITEPQEKPQEKHMRPRSRDPDTRAEHRIHEA
TRLVEDKLEQYMGAIEASKGPEVAQQFVREYELMMDLLSKEYQGFKDFQQKQPTQTPISK
TSPKSVSKTTQRSASKKGIIKMPTQSASRRPTEDINDDYEEERDIEQDYGKKRPQVKIEK
QEEDARPENDSRRAQKGMHELEREITQTPTKSLDPHTPQKVVIPNTGVWARARSTISRSC
RAVVGTWQTTTSPLLLLATSFFFWQAIRLALTFFCLDDDEEFVRQQLVQGMSYAEIEHMW
GLRGFNICGGVWRPPVPQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG