YALI0F30459g

Overview

Description similar to uniprot|P40483 Saccharomyces cerevisiae YIL108w unknown function
Locus type CDS
Locus tag YALI0F30459g

Location

Species Yarrowia lipolytica Positions 3807244..3809526
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2283 (nuc.)
Previous locus YALI0F30437g Next locus YALI0F30481g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F30459g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F30459gYALI0F30459g_mRNA-001YALI0F30459g_CDS-001

Nucleotide sequence

 

>YALI0F30459g
ATGAAGGGACTTTTCGGACGAAAGAAAAACGACAGAGAATACTACGGCAGCGACCATGCC
AGCTATGCCGGAGGCTCTCAGACTACACCAGAGAACCATGGGCCCACTCCAGGACCTCCT
CCTGGGCCTCCTCCTGCATCTCAACAGCAGCAGCCTATGGGTGCCCCACCACCACCCGGA
CCTCCTCCTGCTCAGAGCTCGGGTAGCCGGTCCGATGCCCCCAAAATGCTCAATGTGCGA
AACAACGATGTAATGCATGAACGATTCGTCATTGTCCATGGTAACGCTGGACCCAAGGGA
CTGGATGCTATCAACTGCGGAAACGTTGTCGTGACCCACCACCTCAATGAGTTTCCCTCT
CAGCGGTTCCCCGTCGCCGACAACTACTTCAAGGCGTTTGTGCATCTTGCTCCCGGCCCC
AACCAGCTTTGTGTGACCTACGAATACCCCGACAATCGACAGCCAGTGTCTACCTCATTG
ACACTCATCTACACGCCGCTGCTGCAGGACCCACCTCTTCACCTGTGCCTAATTCTGGGC
CGAGACTCCAAGGGTGAATTCCAGAGCCAGAGCTACAAGAAGCAGATCGAGGGTAACTCT
CTTGACCTAGCTGTCAAGAAGATGCGAATGGCTGGATACATGATGAGTGCCTTTACCAAC
GAAATCATGCTACGAAACGGCTTTGGAAACCGAACTTTCCGGTTCCACGAGGAATGGGAC
GTTGATACTCTCAGTAACCGAGAGAGCAAGACATGTAGGAGCACCATTAAAGTACACATT
GTGCGCAGCGAGCTTTCTGTGGCCGAGATCAACTCCCCAGATTACGCCCAGCAAAACAGC
AGCGGCAAGGACACTGGCAAGCTCTTCAATATTGCGTACGACGCTCTTAAGCGACACGGT
CTGCCATTCACCCAGGATGAGGTTGAACACCGAGCTGCTTGTGTTTTCGTTGACTCTGAA
TGGAACATCAAGCGACAACTCATTACCGGACACGCTGCTCTGGGAGGAGGCATTTCCAAC
GTTCGACTTGCCATTTTCGGAGGCCATGCCCTCTGGACCTGGCCCTCTTGTGTGGAGGAG
ATGGTTCCTGCTCTTCTTGACAACACTATGGTGGATGTTCGAGAAGTCGCGAACGACTCT
CGACAGAGCGGAAGTGCATGGGAGGCACTCAACGTCTCCCAGGGAGCGTTTATGCACGAG
ATCGGTCACCTGTTGGGCTGCCCCCATCAGCCCGATGGTATCATGCTAAGAGGCTACCTC
ACTTGGAACCGATCATTCCTGGCAAAGGAGGTCACCCTAGGAAAGGGATTCCATCGACCT
TGCCTCCCCGCAGACGAGTGCTCCTGGCATAGACTGGATGCTCTGCGTTTCAGACATCAT
CCCTCTTTCCGACTGCCTCACGAACACTTCCCTGCCCCTGGCAAGCCCAACCTCTACCCT
GTGGAGAATGGTACTATCGCCAAGGCCACTTCAGGCATCTACCTGGTGGAGGTGCATGTT
GAGGATTGGTGCCGAGGCCATCTGGAGTTTGCTGAGGACCCTCAGCGAGAGGTTTTCTTG
TTTGAACATGATCTGCGACAGGCCATCAAGGACCCTCAATACCGAGACCCCAAGAAGCCC
ATGCGGCTGGAGATTCTCAGTGTTGGTGGCCAGGTGACCATTGACGATTTCTCCAAGGCT
CTCTGTGCACGTGATCAGAACAACGCCTTCCAGTCTTACGAACTTGGAAACAAGATTGGA
GACGAGACAAAGGCATACTTTGGCCATCACAACCTTGTTGGAGTACGTCTTTATGCCGGT
GATGCTGTTGACGGTGTGGAGTTCCTCACACAGGGATCCTCTGTGCTTTTCGGTAAGAGG
GGCGGTAAGATGACCGAGACAATCTTTGAACCTGGAGAGCACATTGTGGGATTCTTCGTG
CGAGCAGGTTACTGGCTCGACGCTATTCAGCTCATTACTAACCGACGACGATCTGCCCTG
GTTGGTAAGACTGGCGGAGGTGACCCTCATGAGCTGATTCCTCCAACTGGATACAGGTTG
GTTGGTATGCACGGTCATATGGTCAACTGGCTGTACGGTATTGGTGTTGTCTATGAGGCC
ATTCAGTAGATGGACCGGGGTGAAAGTGATGAACATGGCCACGCGATAAGATTGATCGTG
GGACACGAAACCAATCATGAATTGGTAAATATTTTATTTGATTATTAGTTATTAGTTTAC
ACATCCGGGAGATTTATAATTGAGGGTATATAATGTAGTACATTATTGGCCAGAATGGTG
TAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F30459g_CDS-001

Protein length: 703 aa.
Product: Metalloendopeptidase, putative

>YALI0F30459g_CDS-001 MKGLFGRKKNDREYYGSDHASYAGGSQTTPENHGPTPGPPPGPPPASQQQQPMGAPPPPG
PPPAQSSGSRSDAPKMLNVRNNDVMHERFVIVHGNAGPKGLDAINCGNVVVTHHLNEFPS
QRFPVADNYFKAFVHLAPGPNQLCVTYEYPDNRQPVSTSLTLIYTPLLQDPPLHLCLILG
RDSKGEFQSQSYKKQIEGNSLDLAVKKMRMAGYMMSAFTNEIMLRNGFGNRTFRFHEEWD
VDTLSNRESKTCRSTIKVHIVRSELSVAEINSPDYAQQNSSGKDTGKLFNIAYDALKRHG
LPFTQDEVEHRAACVFVDSEWNIKRQLITGHAALGGGISNVRLAIFGGHALWTWPSCVEE
MVPALLDNTMVDVREVANDSRQSGSAWEALNVSQGAFMHEIGHLLGCPHQPDGIMLRGYL
TWNRSFLAKEVTLGKGFHRPCLPADECSWHRLDALRFRHHPSFRLPHEHFPAPGKPNLYP
VENGTIAKATSGIYLVEVHVEDWCRGHLEFAEDPQREVFLFEHDLRQAIKDPQYRDPKKP
MRLEILSVGGQVTIDDFSKALCARDQNNAFQSYELGNKIGDETKAYFGHHNLVGVRLYAG
DAVDGVEFLTQGSSVLFGKRGGKMTETIFEPGEHIVGFFVRAGYWLDAIQLITNRRRSAL
VGKTGGGDPHELIPPTGYRLVGMHGHMVNWLYGIGVVYEAIQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG