YALI0F28479g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F28479g

Location

Species Yarrowia lipolytica Positions 3620529..3621270
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 742 (nuc.)
Previous locus YALI0F28457g Next locus YALI0F28501g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F28479g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F28479gYALI0F28479g_mRNA-001YALI0F28479g_CDS-001

Nucleotide sequence

 

>YALI0F28479g
ATGACACTAAAGGAAATATATAGCTCCTGCCTGGGGTGTTGTCAGCGACAGAACGATACC
ATCCAGTTCGACATGTACGAGGAGGAGGAGGAGGCCCAGGCCCTGCTGTCTCAGGAGGGG
GCTGAACCGGCCAATGAGTTTGGAGAGTATGTTGCGGCCGCCAACCCGGGAGAATTCGGC
ATTGAACACTCCATAGGGGACACAAACGTGAGGCAATGGCTTTCGGGTCTGGCTGTTCAG
GCTAGCACGGGATGGTCCGGATGGTCAGGCTGGTCCTGGGGGTTATTCGGCGGCAGGGGT
CATAGACTGCCTGAACCAGAGGACCAGAGGCCCATGAACTACGCCGATAGAAGCGAAAGC
TCGGGCTCTCTACGGTCTAGGAACGACCTACTTGGATTCGAGGACCAAGCACCTAGTGCC
ATTATGGATGCCGAACAACTATCCGATGGGTTTGCGCGCGAACTGATTTTTGGCACAAGT
ACCATTTCAGGGAACAGTGAGAGAACGGCCCCTAGATCCAACAGCATCGTGAGTGGTCAA
AGTGGAGACAGCACTGAGACAAAACATACCAACTAACTGATAAAGAGCTCATTAACCGAT
CTGGGACTCACTAATAACCTTGGGCCTCCAAACCATACCGGGACTATTGGCCAATAATCC
ATGGCTGCTACCATCCCAAGCCATTATTTATATACACATAAGGGGTAATTAGGTATTTAT
ATATGAAACGTATTACAGTGTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F28479g_CDS-001

Protein length: 192 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F28479g_CDS-001 MTLKEIYSSCLGCCQRQNDTIQFDMYEEEEEAQALLSQEGAEPANEFGEYVAAANPGEFG
IEHSIGDTNVRQWLSGLAVQASTGWSGWSGWSWGLFGGRGHRLPEPEDQRPMNYADRSES
SGSLRSRNDLLGFEDQAPSAIMDAEQLSDGFARELIFGTSTISGNSERTAPRSNSIVSGQ
SGDSTETKHTN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG