YALI0F26609g

Overview

Description similar to uniprot|P28789 Saccharomyces cerevisiae YDL205c HEM3 porphobilinogen deaminase
Locus type CDS
Locus tag YALI0F26609g

Location

Species Yarrowia lipolytica Positions 3404962..3406011
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1050 (nuc.)
Previous locus YALI0F26587g Next locus YALI0F26631g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F26609g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F26609gYALI0F26609g_mRNA-001YALI0F26609g_CDS-001

Nucleotide sequence

 

>YALI0F26609g
ATGTCAGTAGAGGAACGACCAGTGATTTTTGACGACCAGAGCGAACTGCCCAAGGTCTTT
GTGGGTGGCCGAAAGAGCAAGCTGGCTCTGGTCCAGACCCAGCATGTGGCTGCTATGCTC
AAGAAGGTCCATCCCGATTACTCCTTCCCTGTGCTCGGTCTGACTACTTTGGGTGACCAG
GTCCAGAGCAAGCCGCTGTACTCGTTCGACGGCAAGGCTCTGTGGACCAAGGAGCTGGAG
ACTCTGCTTCTAGAGAAGGTGCCAGGCTTTGACCAACAGGATATTATCGTCCACTCCCTG
AAGGACATGCCTACCGTCCTGCCCGACGGCTGTGAGCTCGGAGCTATTCTCACCCGAGAG
GACCCTCGAGATGCTCTAGTTATGGCCGCTGGCTCTCCCTACAAGACTCTGGCCGATCTT
CCTGCTGGATCAGTGGTTGGAACATCTTCTATTCGACGATCTGCCCAGCTGAAGAAGTCG
TATCCCGGACTTGTCTACGAGAGTGTGCGAGGTAACGTGGGCACCCGTCTCAGCAAGCTG
GACGATCCTGAGACTCCCTACAAGTGTCTGATCCTGGCAGCCGCTGGTCTGAAGCGGCTG
GATCTCGGAGACAGAATCACAGGCTACCTGCAGAAGCCCGATATGCTGCACGCTGTGGGC
CAGGGAGCTTTGGGCCTGGAGATCCGACAGGGCGATGAGAAGACCAAGAAGATCCTCGAG
GCAATCTACGACAAGGAGTCCACTCTGTGCTGTCTTGCCGAGCGAGCTGTCATGCGAACC
CTGGAGGGAGGCTGCTCCGTGCCCATTGGCGTTGAGACAAAGTACGAGAATGGCAAGTTG
ACTTTGGACGCCATTGTCGTGTCTGTTGAGGGTACCGAGTTTGTCGAGTGCACTCAGGTT
CGAGCGGTTGAGGAGAACTGGGAGGCCGAGCAACTTGGTAAGGACGTAGCCGAGCAGCTG
GTCAAGGATGGCGCCAAGAAAATTCTGGACGCCATTCACCTGGAAAATATTAAATAGTGT
ATATATGATGAATTGATGATCACGAATGAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F26609g_CDS-001

Protein length: 339 aa.
Product: Porphobilinogen deaminase, putative

>YALI0F26609g_CDS-001 MSVEERPVIFDDQSELPKVFVGGRKSKLALVQTQHVAAMLKKVHPDYSFPVLGLTTLGDQ
VQSKPLYSFDGKALWTKELETLLLEKVPGFDQQDIIVHSLKDMPTVLPDGCELGAILTRE
DPRDALVMAAGSPYKTLADLPAGSVVGTSSIRRSAQLKKSYPGLVYESVRGNVGTRLSKL
DDPETPYKCLILAAAGLKRLDLGDRITGYLQKPDMLHAVGQGALGLEIRQGDEKTKKILE
AIYDKESTLCCLAERAVMRTLEGGCSVPIGVETKYENGKLTLDAIVVSVEGTEFVECTQV
RAVEENWEAEQLGKDVAEQLVKDGAKKILDAIHLENIK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG