YALI0F26587g - SKT1

Overview

Description uniprot|Q6C098 Yarrowia lipolytica YALI0F26587g SKT1 Succinyl-CoA:3-ketoacid-coenzyme A transferase, putative
Locus type CDS
Gene name SKT1
Locus tag YALI0F26587g

Location

Species Yarrowia lipolytica Positions 3402201..3403795
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1595 (nuc.)
Previous locus YALI0F26565g Next locus YALI0F26609g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F26587g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F26587gYALI0F26587g_mRNA-001YALI0F26587g_CDS-001

Nucleotide sequence

 

>YALI0F26587g
ATGTTCTCTGTTCGAAAACACATTACCAAGGCGCTTCTGCAAACTCGTTTCTACTCTGCT
GCCGCCAGATCTAAGGTCTACGCCTCTCCCGACGAGGCCGTCAAGGACGTTAAGTCCGGC
GATCTGGTTCTCTCTGGAGGCTTCGGAATCTGCGGTATTCCCGACACTCTCATTTCTGCT
CTGCAGAAGAGAGGAAACGTCAAGGACCTGACAGTGGTTTCTAACAATTGTGGTATTGAG
GGTAAGGGTCTGTCTAAGCTGCTTGAGAACGGCCAGATCTCCAAGTTCATTGGCTCCTAC
GTCGGAGGCAACAAGTTCTTCGAGGCTGCCTACCTCAACGGCGAGCTCGAGCTGGAGCTG
ACCCCCCAGGGAACCATCGCCGAGAGATGCAGAGCTGCTGGTGCCGGCATTCCAGCAGTG
TACACTCCTGCAGGAGCCAACACCTGGCTGGAGCAGGGCAAGATCCCCACTCTCTACGCT
AAGACCTCCGACGGAAGCGGTGCAGTGATCAAGACTAACACTCCCCGAGAGACCCGGGAG
TTCAACGGCAGAAAGTTTGTGTTGGAGAATGCCCTTAACGGAGACGTGTCTCTGATCAAG
GCCTGGAAGGCCGACACTCTGGGTAATCTAGTGTTCCGAGCCACCTCTAACAACTTTAAC
GGAGCCATGGCACGAGCTGGAAAGCTCACCATTGCCGAGGCTGAGGAGATTGTCGAACCC
GGAGAGATCAAGCCCGAGGAGGTTCATGTTCCCGGTGTCTACGTGCACAGAGTTGTGAAG
TCGACTGCCAAGAAGGACATTGAGATTGTCAAGAACTCTTCTCCGAAGTCCAGCGACGGC
GCTGCTGACCCCGCCTCCATGTCTGCCTCTGCTCTGCGACGAGAGAAGATTGTGCGACGA
GCTGCTCAGGAGTTCAAGGACGGCATGTTCGCCAACTTGGGTATTGGTATGCCTACCCTT
GCCCCCAACCATGTCTCTGACGATATCCACGTGATCCTGCAGTCCGAGAACGGTATTCTT
GGTCTCGGTCCTTACCCCGAACCTGGAAAGGAAGACCCTGACTACATCAACGCCGGAAAG
GAGACTGTCACTCTCGATAAGGGAGCTTCCGTTTTCGGATCCGAGGAGTCTTTCGCCATG
ATCCGAGCTGGAAAGATTGATATGTCCATTCTGGGTGCCATGCAGGTGTCTGGTAACGGA
GACCTTGCGAACTGGGCTCTTCCCGGTATGATTAAGGGTATGGGTGGAGCTATGGATCTT
GTAGCCAACCCTCTCAACACCCGAGTAGTGGTTGTCATGGACCACGTTGACAAGAAGGGC
CGACCCAAGATTCTCAAGGAATGCCAGTTCCCCCTGACCGGCTCCCGATGCGTATCCCGA
ATCATTACTGATTTGGCTGTCTTTGATGTCGACATTGCCAACAACGGTGGACTCACTCTG
ATTGAGATTGCCGAGGGCGAGACCGTTGAATCTATCCGAGAGAAGACCGAGGCTCCTTTC
GAGGTTTCCAAGGACCTTAAGACCATTGATGTTCTCTAAGACAAAAGCACAAGTATATTA
GAAGGTGTATGCATATATTAATGATTTATGATTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F26587g_CDS-001

Protein length: 513 aa.
Product: Succinyl-CoA:3-ketoacid-coenzyme A transferase, putative
Gene: SKT1

>YALI0F26587g_CDS-001 MFSVRKHITKALLQTRFYSAAARSKVYASPDEAVKDVKSGDLVLSGGFGICGIPDTLISA
LQKRGNVKDLTVVSNNCGIEGKGLSKLLENGQISKFIGSYVGGNKFFEAAYLNGELELEL
TPQGTIAERCRAAGAGIPAVYTPAGANTWLEQGKIPTLYAKTSDGSGAVIKTNTPRETRE
FNGRKFVLENALNGDVSLIKAWKADTLGNLVFRATSNNFNGAMARAGKLTIAEAEEIVEP
GEIKPEEVHVPGVYVHRVVKSTAKKDIEIVKNSSPKSSDGAADPASMSASALRREKIVRR
AAQEFKDGMFANLGIGMPTLAPNHVSDDIHVILQSENGILGLGPYPEPGKEDPDYINAGK
ETVTLDKGASVFGSEESFAMIRAGKIDMSILGAMQVSGNGDLANWALPGMIKGMGGAMDL
VANPLNTRVVVVMDHVDKKGRPKILKECQFPLTGSRCVSRIITDLAVFDVDIANNGGLTL
IEIAEGETVESIREKTEAPFEVSKDLKTIDVL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG