YALI0F20834g

Overview

Description weakly similar to uniprot|P87119 Schizosaccharomyces pombe Zinc finger, C3HC4 type, putative transcription factor
Locus type CDS
Locus tag YALI0F20834g

Location

Species Yarrowia lipolytica Positions 2776252..2777583
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1332 (nuc.)
Previous locus YALI0F20812g Next locus YALI0F20856g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F20834g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F20834gYALI0F20834g_mRNA-001YALI0F20834g_CDS-001

Nucleotide sequence

 

>YALI0F20834g
ATGTCTACCACCGCGTCGATCACAATCTTGACAGGGACACCCACAAATACACCGGCTACG
CCTACGACCTTCAACACTTTAGTCACCTCACTAACGGCCACTCTAGGACCCACATCAACT
CAAAGTGGGCCTCCTTCTGGTGTCCCCACAAACCCAAACTCTCAGCAACAACGCAACACT
TCTACTACACAGAACTATCTGTTCTTCATTGCCCTCGCTCTTGGAATTGTCTTTGTCAAT
CTCTGGATCATTCTGGGCATCCGGTTCCTATATCGACGACGCCAGCGACAACGAGCTGTG
TCGGATCCTGAGAACCAATCTCCCGATCCCATGATTCCCATGATTGCCCGCGGTATGGTG
ATGACAGGAGGCCATCCCAGAGCCAGGCAGCGAAGGAAGCGACAAAAGAAGGTGGTGTCG
CTGGCATTCATGGACGACAACTTCCCTATGACACGCTACGCCGACTGGAAAAACGGTACA
TACACCAACGAAAAGAGCGTGGACGAAAAGGTACTGGAGAAAGAAGTCGCAGAAAGAAAC
ATGACAGAAAAGGAAATGGAGGCTTTCAGCGATGACGCTATTGAAGACTCCGCAAACCAC
ACTACCATCGTCGTGGAGGAGGATATCGGTAATGTGGGATTTTTGTCGTTATCTAACTCT
GCAGGTGCATCTGCGTTATCGCTCACGGAAACAAACTCTAGAACCGACAGAGTGGAGCCA
CCTTCAGATCCCGATACGTGTGCGATTTGCATCGAGCAGCTAGAGGACTGTGATGAGATC
CGTGTTCTTAAGTGCAACCACGTGTTTCACTTCTCTTGCATCACTCCCTGGATGACTAAT
CGAAATGCGTCTTGTCCGCTGTGCAAGACACAATATTACATTCCCCCACCCCCTCCCATG
CCTGACTGGCTGGCTAGCAATGGGCAGGTCCCCACACCAACTGTAGATACTAGGGTCACT
AGTACAGCTACAGCCACCACCACGACGACCTCAGGGTCAGATGATAGCCCCTCATTGTCC
TCGCAGACGCAGATACCTCTTGCAGAACTGCCGCCTGCAGCAACCTCTCGACTGTCGCGT
TTCAAGAGGGTCATGAGGCTGACGTGAGCCAGTGTGCCCAAGATAATTCAGGCTGGATGA
TGGGTTATTTTTTCTTGGTTAGGCAAGCTACTCGCTAATTTTTCCATGGGTCTCATTGTC
TATTATTTATTATCGAGACCTTCCCTCTCGCACAGGTTTTAACTGCAAGATCGCACATGG
TACTTGTAGTGTAAATAGGATTAACTTATATATAGCTACTCCAGAACGAGAACAAGTACT
TGTACGATAGAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F20834g_CDS-001

Protein length: 369 aa.
Product: Conserved hypothetical protein

>YALI0F20834g_CDS-001 MSTTASITILTGTPTNTPATPTTFNTLVTSLTATLGPTSTQSGPPSGVPTNPNSQQQRNT
STTQNYLFFIALALGIVFVNLWIILGIRFLYRRRQRQRAVSDPENQSPDPMIPMIARGMV
MTGGHPRARQRRKRQKKVVSLAFMDDNFPMTRYADWKNGTYTNEKSVDEKVLEKEVAERN
MTEKEMEAFSDDAIEDSANHTTIVVEEDIGNVGFLSLSNSAGASALSLTETNSRTDRVEP
PSDPDTCAICIEQLEDCDEIRVLKCNHVFHFSCITPWMTNRNASCPLCKTQYYIPPPPPM
PDWLASNGQVPTPTVDTRVTSTATATTTTTSGSDDSPSLSSQTQIPLAELPPAATSRLSR
FKRVMRLT*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG