YALI0F20856g

Overview

Description highly similar to uniprot|Q03048 Saccharomyces cerevisiae YLL050c COF1 cofilin, actin binding and severing protein
Locus type CDS
Locus tag YALI0F20856g

Location

Species Yarrowia lipolytica Positions 2778716..2779848
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1133 (nuc.)
Previous locus YALI0F20834g Next locus YALI0F20878g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F20856g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F20856gYALI0F20856g_mRNA-001YALI0F20856g_CDS-001

Nucleotide sequence

 

>YALI0F20856g
ATGGTGAGTAAACAACGTGGAGTCAACCCGGATTTCGACCTGCGGGCAATGCAATTGGGC
GAATTGGGCACTTGAGAGATCTGGTTGGAGTCTACAGAATGATCCTTGTGTCATAACGAC
GACATCGACGACTTGGAATTTAATGGCGCTTGGGGTTTGGGGTTCGGGACTCATGGCATC
ATGGGGGTGTGATAAGACGAGCATCGACAATTTGAACGATCCGAGAAAGACATGACACCA
CCAAACTACATGGCAACTGCAAGAATGATGACCCCCTTCTGGTGATGTCACTTTGTCTGC
GTTTACAAGATTGATGTTTCAACCATGTTGCTCGAAAAGCACAATGGTGTGTCGTATGTC
TCATCGGCTGTCACGGTGATACCCAAGCGTATGACCATCCAGCCACGTCTTTGCCGCCTC
GCGCCTATTGTACCTTCTTTCGTCTGATTCTTGTTGGTTCGGCATATGACCCTCTCGATA
TGCGGCTTCTGCCACAAAGGCCCCAGTATTGCCCTTTAACTTTTGAAGCACGAGAACAAT
GGGGTGATGGAAAACATGCTCGCCGTTGTAGCATGCGATGAAGCAGGTCGATATGGAAGG
GGAATATTCAGAGCAAGTGGAGATTTATATATGTGATGGAACACAACGTTGTCATACATA
GCTAACTCAGTCCCGATCCGGTGTTGCCGTTAACGACTCTGCCCTCCAGGCTTTCAACGA
GCTCAAGCTCGGCAAGAAGGTCACCTTCATCATTTACAAGATCAACGATGCCAAGACCGA
GATTGTTGTCGAGGAGGAGGGAACCACCGACTCTTACGACACCTTCCTCGGCAAGCTGCC
CGAGAACGACTGCCGATACGCCGTCTACGACTTTGAGTACGAGATCTCCAGCGGTGAGGG
TAAGCGATCCAAGCTTGTCTTCTTCACCTGGTCTCCCGATACCGCTCCTGTCCGAAGCAA
GATGATCTACGCCTCTTCCAAGGACTCTCTCCGACGGGCTCTTACCGGTATCTCCACCGA
GATCCAGGGTACTGACTTCTCCGAGGTTGCTTACGAATCTGTTCTCGAGCGAGTTTCTCG
AGGAGCCGGTTCTCACTAAGTATGAAATGTATATTGTGACATGTTTTATAATT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F20856g_CDS-001

Protein length: 144 aa.
Product: Cofilin, involved in pH-dependent actin filament depolarization, putative

>YALI0F20856g_CDS-001 MSRSGVAVNDSALQAFNELKLGKKVTFIIYKINDAKTEIVVEEEGTTDSYDTFLGKLPEN
DCRYAVYDFEYEISSGEGKRSKLVFFTWSPDTAPVRSKMIYASSKDSLRRALTGISTEIQ
GTDFSEVAYESVLERVSRGAGSH*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG