YALI0F16357g - CNT4

Overview

Description uniprot|Q6C1G9 Yarrowia lipolytica YALI0F16357g CNT4 Butyrobetaine dioxygenase, putative
Locus type CDS
Gene name CNT4
Locus tag YALI0F16357g

Location

Species Yarrowia lipolytica Positions 2186124..2187580
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1457 (nuc.)
Previous locus YALI0F16335g Next locus YALI0F16379g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F16357g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F16357gYALI0F16357g_mRNA-001YALI0F16357g_CDS-001

Nucleotide sequence

 

>YALI0F16357g
ATGCTACACACTATCAAGGGTCTTCGACAAGTGCGGGGAGCTCGGGGCTTCTCCGTGAGC
TCGAGAGCGCTTCTTCAGCTCAAAAATGTGACCAAGACAGGTCTTGAAATTGAACTGGAA
CCCGGATCGACCCCCGTTCACTACTCCAACTTTTTCCTCAGAGATGCCGCCTCCTCCACA
AACGCCATTGATCCCTCGACTTCGCAGCGGTACTTTTCTTCCGGCGAGCTGGCCAAGGAC
ATCCATCCCAAGAAAATCCATGTGGGCAAGAAGGAGGGCCAAGCCGACTCTGCCGTGTAC
TCCACTCAGGACACCAAAATATGCCAGCATGATACGGACATTGACGGCCTGAAAATCGAG
TGGTCCGACGGCTTCCAGGAGTACTACACGGCACACTTTCTCAAGCAGTATGCGTCGCCC
GAGGCTTCTCGAAAACGACGACATTTGGCCCAGCCTATTGAACTGTGGGAGAGAAAGGAG
ATTACTGAGGCGCTGGACAAAAACCAAATCCAGACCACGTGGAAGGAATACCAGACCACC
GAGGGTATGCATAAAATCGTCAAGGCTCTGCACGACTACGGTCTGGCGTTCGTGACGGGT
CTACCTGACCAGAAGACAACGGTGGTTGATGCTGAAGACAAGGATGTGGGTACTGTCACA
GCAGAACCCATTCTCGTGGAAGAGGTCGGAAAGAAGATTGGATACATCAAGGAAACCTTC
TATGGCCGATCATGGGACACCCGATCTGTCCCCAACCCCAAAAACGTGGCCTACACTTCG
CAGTACTTGCCTCTGCACATGGACCTGCTCTACTACGAGTCTCCTCCTGGCATTCAGCTG
CTCCACGTCATCAAAAACCAGGCTGTCGGAGGCGAGTCCATATTCACAGACTCGTTTGCA
TCTGCTAAATACGTCTGGGAAAAGAATCCTGCCGCCTACAGAGCTCTGTGTGAGATTCCT
TTGACATTCCATTACATCAACGACGGCCAGCATTACCACAACACCGTGCCCATGATTGTC
GAACACCAGCAGACAGACAAGAGCAAGTGGACCAACCCCAAAGCCATCAACTACGCTCCT
CCTTTCCAGGGCCCCTTTGACGCAGTTGAGCTAGTTGAGGGAGGTGAGAAGTGCGAGCTA
TTCAGAGAAGGTCTCAGACTGTTTGAAGAGCACCTTACCAGCGCTGAAAATGAGCTGCGA
ACAAAGATGGAAGAGAACTCCTGTGTGCTTTTCCTAAACCGTCGAGTTCTTCATTCTCGA
ACCGAGTTTGATGCACAGTCTGGCGTCAGATGGCTCAAGGGAACTTATCTGGACATCGAT
GCCTTCTACTCCAAACTGAGAGTTCTATCAAACGATTCCTAAACCGACTCACTACGCTAT
AGTCTCTCAAACGTATATATACACTAAATATTTTCTATGCTAACGGGGTATGGTCGTCTT
AGATCACCTCGCCAATA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F16357g_CDS-001

Protein length: 454 aa.
Product: Butyrobetaine dioxygenase, putative
Gene: CNT4

>YALI0F16357g_CDS-001 MLHTIKGLRQVRGARGFSVSSRALLQLKNVTKTGLEIELEPGSTPVHYSNFFLRDAASST
NAIDPSTSQRYFSSGELAKDIHPKKIHVGKKEGQADSAVYSTQDTKICQHDTDIDGLKIE
WSDGFQEYYTAHFLKQYASPEASRKRRHLAQPIELWERKEITEALDKNQIQTTWKEYQTT
EGMHKIVKALHDYGLAFVTGLPDQKTTVVDAEDKDVGTVTAEPILVEEVGKKIGYIKETF
YGRSWDTRSVPNPKNVAYTSQYLPLHMDLLYYESPPGIQLLHVIKNQAVGGESIFTDSFA
SAKYVWEKNPAAYRALCEIPLTFHYINDGQHYHNTVPMIVEHQQTDKSKWTNPKAINYAP
PFQGPFDAVELVEGGEKCELFREGLRLFEEHLTSAENELRTKMEENSCVLFLNRRVLHSR
TEFDAQSGVRWLKGTYLDIDAFYSKLRVLSNDS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG