YALI0F16379g

Overview

Description similar to uniprot|P54861 Saccharomyces cerevisiae YLL001w DNM1 dynamin-related protein
Locus type CDS
Locus tag YALI0F16379g

Location

Species Yarrowia lipolytica Positions 2187504..2190223
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2720 (nuc.)
Previous locus YALI0F16357g Next locus YALI0F16401g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F16379g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F16379gYALI0F16379g_mRNA-001YALI0F16379g_CDS-001

Nucleotide sequence

 

>YALI0F16379g
CATCAAGGTGAGTAAAACGAGCTTGGATGCGCCTGGCCAAAGGTCGCACACACGCCCAAT
GGCCGGGAATCCAATGGAAGCGCACTTTGGGCCTCCTATTGCTGGCTGTGGCTTCGTTAT
CCGTCTTCTTCACATGGTGGATCATCACAGTGGCGCAATGATGTTGATGCTGGTGGTGTC
CCGATGGTGGCTTTGAGGTGATTCTCGACACGTCAGCAGGAGTGTCATCCCCGTCAACTA
CACGCAACTTATCACTGAGTTGGATACATGGCCATGTTAGATTTTGGATACTTCAAGTCG
GATACGTTTAGACATGTGAACCACGACACATCCAGAAACACCACTAACCCAGATGTCGGC
ATCCCTAGAAGACCTGATCCCCCTGGTCAACAAACTGCAGGACCTCGTGTTCAACACCAT
TGGCTCCGACACACTCGACTTGCCCCAGGTCGTGGTGGTCGGCTCCCAGTCGTGTGGTAA
GTCGTCGGTGCTGGAAAACATTGTGGGTCGAGACTTTCTGCCCCGAGGTACTGGCATCGT
CACCCGACGACCTCTCGTGCTGCAGCTCGTCAACCTGCCCTCTGAAGAGAAGGACCGTCC
TGGATCCAGTGGCGAGGTGCACACTCGAACCCCCAAGTCCAACTCGGTCGAATGGGGAGA
GTTTTTGCACATTCCCGGACGACAGTTCTACGACTTTGAGGAGATTCGAAAGGAGATTGA
GAATGAGACGGTGCGAATTGCCGGAAACAACAAGGGCATCAACCGAATCCCTATCAACCT
CAAAATCTTCTCACCCCACGTGCTCAACCTGACGCTGGTTGATCTGCCCGGTCTCACCAA
GATCCCTATTGGCGATCAGCCCACCGACATTGAGCGACAGACCCGTCACCTCATCTGCGA
GTACATTGCCAAGCCCAACTCCATCATCTTGGCTGTCTCCCCTGCCAACGTGGACATTGT
CAACTCCGAGTCACTTAAGCTCGCCCGACAGGTCGATCCCCACGGCAAGCGAACCATTGG
TATTCTCACCAAGCTGGATCTAATGGACCAGGGTACTAACGCCATGGATATCCTGTCTGG
CCGGGTATACCCTCTCAAGCTGGGCTTCATTGGTGTGATCAATCGATCTCAGCAGGATAT
CCACGCCAACAAGCCCCTGTCCGACTCGCTGGAGGCCGAGAGGGAGTTCTTCCAGAACCA
CCCCGTGTACAGAAACATCTCCCATAAGTGCGGTACCCAGTTTCTCGCCAAGTCTCTGAA
CCAGACTCTCATGAACCACATTCGGGAGAAGCTGCCCGACATCAAGGCCAAGCTCAATAC
CCTTATGGGCCAGACCGAGCAGGAACTGTCCAGCTACGGAGTGTCATACCTCAACTCTGG
CGAGTCCAAGGGCACTCTTATTCTGCAGCTCATGACCAAGTTTGCCTCCAAGTTCGTCAC
CTCCATCGAGGGTACCGCCGCCGTCTCTACCAAGGAGCTGTGCGGAGGCGCTCGAATCTA
CTACATTTACAATGATGTGTTTGGTACAGCGCTGTCTTCGATAAGCCCCACCGCCAACCT
GTCCATCAACGACATTCGAACCGCCATTCGAAACTCCACCGGTCCCCGACCCTCGCTCTT
TGTTCCGGAGCTCGCCTTTGATATGCTTGTGAAGCCTCAGATCAAGCTGCTGGAGCCGCC
CTCCCAGCGATGCGTCGAGCTTGTGTACGAGGAGCTCATGAAGATCTGCCACAACTGCGG
ATCTCCCGAGCTCTCTCGGTTTCCTAAACTTCAGGCCAAGCTCATTGAGTGTGTCTCCGA
CCTGCTGCGGGAGCGACTTGGCCCTACCGCCTCGTACGTGGAGTCTCTGATCGCTATCCA
GCGAGCATACATCAACACCAACCATCCCAACTTCATTGGCGCTGCCGACGCTATGGCTAC
CGTGGTGGAGGAGAAGAAGCAAAAAGAAAACGCCAGCCGGCAGAAGGATATGCGACGAAA
GCACATGGATATGCTCCCTCCCAACGGCAAGGATACCCCTCAGGCCATCGAGAATGGTCC
TGACGACGACTCCACGTCTTCTCGACCTGGTTCTACCGAGGGTGGTAAGGACCACCAGCG
AGAGGCCCATCATCACCGAACCCCTTCCACCGCCACTAACGCCTCCGGAGAGCCCAAGGA
CACATTCCTCAACTACTTCTTTGGCAAGGACGCCGATGGCAACCCTGTCATGCCTCCCCC
CGGTGCTGCTGGCGTGAAGGGTCAGTTCCCCAATGGTTTCTCGTCCTCCGGAGGCTCCCA
GAAGGGTCCCCACGACAAGAAGCACATTTCGGACCCCATGGACACCATGGCTTCTGCATT
TGACGACATGGATCTCGAGGAAGGCGAGCAGCTGTCCGACCGAGAGAAGCTCGAGACTGA
GTTGATACGACGACTGATTGTGTCGTACTTCAACATTGTGCGAGAGTCCATCCAGGACCA
GGTCCCCAAGGCGGTCATGCATCTGCTGGTCAACTTCAGTAAGGAGAGCGTTCAGAACCG
ACTGGTCAGCGAGTTGTACAAGGAGGCTCTGTTTGATGCCCTTCTGTTTGAGGACGAAAA
CCTGGCCCAGGAGCGAGAAAAGTGCGAGACTCTGCTCAAGACTTACAAGGAGGCTTCCAA
GATTATTGGCGAGGTGATCTAAGACGACCATACCCCGTTAGCATAGAAAATATTTAGTGT
ATATATACGTTTGAGAGACT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F16379g_CDS-001

Protein length: 770 aa.
Product: Dynamin-related GTPase involved in mitochondrial organization, putative

>YALI0F16379g_CDS-001 MSASLEDLIPLVNKLQDLVFNTIGSDTLDLPQVVVVGSQSCGKSSVLENIVGRDFLPRGT
GIVTRRPLVLQLVNLPSEEKDRPGSSGEVHTRTPKSNSVEWGEFLHIPGRQFYDFEEIRK
EIENETVRIAGNNKGINRIPINLKIFSPHVLNLTLVDLPGLTKIPIGDQPTDIERQTRHL
ICEYIAKPNSIILAVSPANVDIVNSESLKLARQVDPHGKRTIGILTKLDLMDQGTNAMDI
LSGRVYPLKLGFIGVINRSQQDIHANKPLSDSLEAEREFFQNHPVYRNISHKCGTQFLAK
SLNQTLMNHIREKLPDIKAKLNTLMGQTEQELSSYGVSYLNSGESKGTLILQLMTKFASK
FVTSIEGTAAVSTKELCGGARIYYIYNDVFGTALSSISPTANLSINDIRTAIRNSTGPRP
SLFVPELAFDMLVKPQIKLLEPPSQRCVELVYEELMKICHNCGSPELSRFPKLQAKLIEC
VSDLLRERLGPTASYVESLIAIQRAYINTNHPNFIGAADAMATVVEEKKQKENASRQKDM
RRKHMDMLPPNGKDTPQAIENGPDDDSTSSRPGSTEGGKDHQREAHHHRTPSTATNASGE
PKDTFLNYFFGKDADGNPVMPPPGAAGVKGQFPNGFSSSGGSQKGPHDKKHISDPMDTMA
SAFDDMDLEEGEQLSDREKLETELIRRLIVSYFNIVRESIQDQVPKAVMHLLVNFSKESV
QNRLVSELYKEALFDALLFEDENLAQEREKCETLLKTYKEASKIIGEVI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG