YALI0F16005g

Overview

Description similar to uniprot|Q7S9Y9 Neurospora crassa NCU07929.1 hypothetical protein
Locus type CDS
Locus tag YALI0F16005g

Location

Species Yarrowia lipolytica Positions 2153223..2154361
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1139 (nuc.)
Previous locus YALI0F15983g Next locus YALI0F16027g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F16005g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F16005gYALI0F16005g_mRNA-001YALI0F16005g_CDS-001

Nucleotide sequence

 

>YALI0F16005g
ATGACTACGACTCGTGTGTGTATCGACTCTTCGGTTGCTCTCAAAATCGTGCGGCACTGC
CAGGAAAGCGCGCCTTCCATTGTCGCCGGTCAGCTGCTCGGTTTGGATGTGGATGGCGAG
CTTCGAATCTCCCATGCCTTTGCCTTCCCCCAGAATGCCGCTGGAGGCAACCCCAACTCC
GACGACGGCCTCAGCTTGCGTCTTAAGGCCGTGGCCAAGTACCAGCCCGAGATGATCGAC
CATCTGAAGGAGGTCAACGTCGATTCCAACAGCGTCGGCTGGTACCAGAGCACTGTTCTG
GGCCGAATCTACAACGCTTCGGTTATTGAGAACCTCGCCGTGTTCCAGGAGAAGAACCCC
GACTCTGTCGTTCTTGTGTACGATGTAGCCGGTTCCGAGGTTGTTTCCGACACCGATCCA
TCTTCCACCGGCCCCCAGGGACATACCACCACCACCCCCTCCGGCTTCAACCTGCGAGCC
TTCCGACTGTCTGAGGAGTACCTCAACGTGCGAAAATCCGGCAAGTTCGACACCGCCACC
CTCACAGAGAACAATCTAACCTACCACGATGTGCTGGTCGAGCTGCCTGTGGAGATCAAG
AACTCCAATCTGGCCACTCTGCTGCTGTACCAGCTGGGCCAGCAGTACCCCAACTCGCCC
TTTGCCGAGTCCTCCTTCTCCAACCTCAACGTCTCAGTTGACCCCTTCCTTGAGAAGAAC
ATCGAGGCCATCTTCGACTCAGTCGACGACTTCCACTACGACCAGGGTAACTACAATTAC
TACCAGCGACAAATGACCCGAGAACAGGCCAAGATCACCCAGTGGCAGCAGAAGAGAAAG
GCCGAGAACGCGGCACGAGAAAAGGACGGCCGACCGGCTCTCCCCACAGACGAGTGGAAG
CGGCTCTTCAAGCTTCCCACCGAGCCCTCGCGACAGGACAACCTGCTGATTTCCGCGCAG
CTCAACGAGCACTGCTCCGTCATCGAGGAGTTCGGTGCTGCCGTCAACAGCAAGCTGTTT
GCTACCCAGGGAGGACTGCTTTAGAGGTAGTATGCTAGAGAGGATGAAAAATGTGTGGAT
AGACAACACACGACAAAAGGATGGATTACAGTATGTTAGATAAGCATTGATAAGAGGCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F16005g_CDS-001

Protein length: 348 aa.
Product: Conserved hypothetical protein

>YALI0F16005g_CDS-001 MTTTRVCIDSSVALKIVRHCQESAPSIVAGQLLGLDVDGELRISHAFAFPQNAAGGNPNS
DDGLSLRLKAVAKYQPEMIDHLKEVNVDSNSVGWYQSTVLGRIYNASVIENLAVFQEKNP
DSVVLVYDVAGSEVVSDTDPSSTGPQGHTTTTPSGFNLRAFRLSEEYLNVRKSGKFDTAT
LTENNLTYHDVLVELPVEIKNSNLATLLLYQLGQQYPNSPFAESSFSNLNVSVDPFLEKN
IEAIFDSVDDFHYDQGNYNYYQRQMTREQAKITQWQQKRKAENAAREKDGRPALPTDEWK
RLFKLPTEPSRQDNLLISAQLNEHCSVIEEFGAAVNSKLFATQGGLL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG