YALI0F16027g

Overview

Description similar to uniprot|P22507 Saccharomycopsis fibuligera Beta-glucosidase 2 precursor
Locus type CDS
Locus tag YALI0F16027g

Location

Species Yarrowia lipolytica Positions 2155280..2157814
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2535 (nuc.)
Previous locus YALI0F16005g Next locus YALI0F16049g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F16027g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F16027gYALI0F16027g_mRNA-001YALI0F16027g_CDS-001

Nucleotide sequence

 

>YALI0F16027g
ATGATCTTCTCTCTGCAACTACTACTGACGACGGCACTAGCGGCCTCTTCGCCTGACTGG
TACCCCACACCCGAAATCGGTTCAATTACCAGTGATTGGGCCGATGCTCTTGGTGAGTCC
ATGGACATCCTGGCCCAATTGACTCTTCCCGAAAAGGTCAACATCACCACCGGTACCGGA
TGGAGAGGTGGGCAGTGTGTTGGAAACACAGGGGCTGTTCCTCGTCTCGGAATCAAGGGC
CTGTGTCTCCAAGACGGTCCTCTGGGCGTCCGTTTTGCCGACTTTGTCAATGTCTTCCCT
TGCCAGAACGCAATGGCCGCCACCTTTGATCGTATCCTAGTTCACCAACGAGGAACCGCT
ATTGGACGTCAGTCTAGACTCAAGGGAGTCGATGTTCATCTCGGACCAGTGGTGGGACCT
CTTGGACGACACGCTACCGGCGGAAGAAACTGGGAAGGTTTCTCCCCCGACCCATATCTG
TCTGGAAAGCTCGCCTTCGAAGCAATTCTTGGAGTCCAGGAAGAGGGAGTTCTTGCAACC
ATCAAGCACTTCATTGGAAACGAACAAGAACATTACCGGCGAGCCGAAGAGTGGAGAGAC
GGCTTTGGATTTAAAGACCTGAAGGACGCCGTCTCTTCCAACATTGAAGACAGAGCTCTA
CATGAGTTGTACATGTGGCCGTTTGCCGATGCTGTTAGGGCTAATGTCGGCTCAGTCATG
TGCTCCTACAACTACGTGAACGGAACCCAGGCTTGCCAGAACAGTGACTTGCTCAACGGA
AAGCTCAAGTCCGAGCTCGGTTTCCAGGGCTTTGTCATGTCCGACTGGTTTGCTCAGGGA
AGCGGAGTGTCTAACGCTCTGGCTGGAATGGACATGAGTATGCCTGGAAATGACGTTGAT
GAGTTAGAAACTGTCTTCTGGGGAGAACAGCTGACCCGAATGGTTGCCAACGGTACCCTT
CCAGAAGCCCGTCTCGATGATATGGTTCTGCGAATTCTGACCCCTCTCATCTACTTTGGG
ATCGACGATCGAACACCCAACTTCTCCTCCTTTGTCGACACTACAGTGGGAAGTCCCCAC
CCCGCTGCTAAGCACTCCAAGAAAGTCAAGGATGTTATCACCAACTACCATCTCGATGTG
CGAGACCAGTTTGCAGCCAATGTTGCTCTTGATAGTGCTCGAGGAGCTGTTGTTCTGCTT
TTCAATGACGGTATTCTTCCCCTGAAGAACATTTCCGCTATTGGAGTATTTGGAGTCGGC
TCTAGACTTGGCCCCAATGGAGCTGTTTGTGGGGAAAACATGCAGTGCTCAGACGGAGCT
CTTATCGAAGGATGGGGAAGTGGAACTGCTTACCCTACGGAGTACGAAAGCCCTTACGAA
GCTCTCCACAAAAAGGCTTCTCTACTTGAAGTGTCAGTGACAGGAACCACCGAGTCATGG
GATATGAGACTTCCTCTTGAGCTGGCTGGAGACACTGACGTGAATATTGTTTATGTATTG
GCAAATTCAGGAGAGTCTACTGCCAACGTTGATAAGAACCTTGGGGATCGCCGAAATGTC
AGTCTATGGCACAATGGCGATGAACTTATTAATACAGTTGCCAGTCAGGGACAGACTGTC
GTTGTTGTCACTACGGTTGGACAAGTTGACATGACCGCTTGGCTCAACCACCCCAACATC
AGTGCCGTTCTTCTGACTGCTCCTGCTGGTGATTACGGAGGAAAAGCCATCGCTGATGTG
TTATTTGGAGAGGTTAATCCCTCAGGAAAGCTGCCTTATACTATCGCAGCAAATACTTCT
GATTATATTCCTATTGTCACCAAGATCCCTCGAGATGGAGCTCCCCAGTCCGACTTTGTG
GAGGGAATCTATCTTGACTACAAGTGGTACGACAAGTTTGAAAGGACTCCCCTCTACGAA
TTTGGTTACGGTCTGTCATACACCACCTACTCCTTCAGCAATCTGCATCTTGATGTTAAG
GAGATTAGTGAGTTCCTTCCTCCCCGGCCTGTTCCTGTACAGGTTACTAAACCCAAGATG
ACCAATATCGACATTGAGGACCTTTATGTCCCCAATGACTTTAAAATGATTGACGGTCTT
GTTTACCCTTGGATTCTCAACGCCAGTGCGCCCCTCGCGGACTCTCAGACTCAGTTCCCC
TTTGCAAATGGAGCTGGACATGTCAGTGACGCTTCTGGAGGAGTGGGTGGTCACCCCTGG
CTTTGGTCTAACGCTGTTACTGTCACTCACAACACCACCAACTGCGGTGATGTTGCTGGA
CGAGTAGTTTCTCAGCTGTACGTTGCCTTCCCTGAAACCCTTATCGACTCTCCTCCGGTG
CAGCTTCGAGGATTCGACAAGTCCAAGCTCCTGAACCCTGGTGAGTCTCAGATGACCGAG
TACAACCTCAACTGGCGAGATCTGGCCATTTGGGACGTGGAACTGCAGAGCTGGAGAGTG
CAGCGAGGCGAGTATTCCGTGTACATTGGTCATTCCAGCCGAGAATTCGAGCTATGTGAG
ACTTTCACTTTGTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F16027g_CDS-001

Protein length: 845 aa.
Product: Beta-glucosidase 2 precursor, putative

>YALI0F16027g_CDS-001 MIFSLQLLLTTALAASSPDWYPTPEIGSITSDWADALGESMDILAQLTLPEKVNITTGTG
WRGGQCVGNTGAVPRLGIKGLCLQDGPLGVRFADFVNVFPCQNAMAATFDRILVHQRGTA
IGRQSRLKGVDVHLGPVVGPLGRHATGGRNWEGFSPDPYLSGKLAFEAILGVQEEGVLAT
IKHFIGNEQEHYRRAEEWRDGFGFKDLKDAVSSNIEDRALHELYMWPFADAVRANVGSVM
CSYNYVNGTQACQNSDLLNGKLKSELGFQGFVMSDWFAQGSGVSNALAGMDMSMPGNDVD
ELETVFWGEQLTRMVANGTLPEARLDDMVLRILTPLIYFGIDDRTPNFSSFVDTTVGSPH
PAAKHSKKVKDVITNYHLDVRDQFAANVALDSARGAVVLLFNDGILPLKNISAIGVFGVG
SRLGPNGAVCGENMQCSDGALIEGWGSGTAYPTEYESPYEALHKKASLLEVSVTGTTESW
DMRLPLELAGDTDVNIVYVLANSGESTANVDKNLGDRRNVSLWHNGDELINTVASQGQTV
VVVTTVGQVDMTAWLNHPNISAVLLTAPAGDYGGKAIADVLFGEVNPSGKLPYTIAANTS
DYIPIVTKIPRDGAPQSDFVEGIYLDYKWYDKFERTPLYEFGYGLSYTTYSFSNLHLDVK
EISEFLPPRPVPVQVTKPKMTNIDIEDLYVPNDFKMIDGLVYPWILNASAPLADSQTQFP
FANGAGHVSDASGGVGGHPWLWSNAVTVTHNTTNCGDVAGRVVSQLYVAFPETLIDSPPV
QLRGFDKSKLLNPGESQMTEYNLNWRDLAIWDVELQSWRVQRGEYSVYIGHSSREFELCE
TFTL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG