YALI0F12969g

Overview

Description weakly similar to uniprot|P22224 Saccharomyces cerevisiae YGL233w SEC15 vesicular traffic control protein
Locus type CDS
Locus tag YALI0F12969g

Location

Species Yarrowia lipolytica Positions 1739469..1742888
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 3420 (nuc.)
Previous locus YALI0F12947g Next locus YALI0F12991g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F12969g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F12969gYALI0F12969g_mRNA-001YALI0F12969g_CDS-001

Nucleotide sequence

 

>YALI0F12969g
CGACATTGCATCTCCACAACACACCTGGACGGTCGCTAAACCCGCACAATTAGGCCGCAA
AACGAGAATCCTGCGCCGTCGACGTCTACCCCGACATCACGTGACCCTCCGCCACTCACA
GAGGAATTGACTCAAACGCCTTATCTCCGAAATTGAGCCCCGTTAAAACACCTCACAATG
TCCAACCCCTACAAGGCTGCGGCCGCGGCTCAAAACGACGCCTACGGGGCCAAGGCGGCC
TCGGCCGATCCCTACGCCTCCGACCCCTACGCCTCCGACCCCTATGCCCAAGATCCGTAC
GCTTCGGAGCCTGCTACAGACCCCTACGCAAACAAGTCAGCGCCGGACCCTTATGCCAAC
AACAACGCCGCGGTAGCTGATCCATACTCCGCTCCGGCAGATCCTTACGGCAACTCTGCA
CCCGTATCGGACCCTTACGCTCAGGCAGCCGCTAACCAGGCCAAATCGTCCCACAGTGAC
CCTTACGCCTCTGCCGGAGGCGGTCCTCGAACACTCCAACAAGCCCCCACAATCACGTCC
AAACCACCACCACAAGCACAAAAACCGCCCATGATGCGCTCAAACACAACTGTGCCGCGA
TCACCCAACGTCACCGCAGCTGACTTCCGGCCCCGAGGGTCCCCGCAGAGTGCCACCACC
CCCTCTCACGGCCGATCGCTGTCAGGAGACATTATGGGAGCCAGCACTGCACCTCTCAAC
GTCAACAAGGCACCGGCTATTCCGTCGCCAAAGGCCTCGCGTCCCCCCCCGGCCACCACG
CCCAGCAGATCGTCTACCATTACTTCGGGCACCCGGTCTGCTGCCACCACTCCGGGTAGA
AGTGCCACCATGAAGATCCCCAATGTCTCCACACCCCCAGCTGTGCCTTCGCTCACCACA
AAGCCACTGACGGTCACTAAGACAAAACCCAAAGCCAAGGAGGAGCCCCAGGAACCGCCC
CAGGACATGTCCCTGCACTTGCAGCAGCTCATGCTATCCACAGACAATGTGCAGAACAAT
TCCTTCTCCGAGGACTTTCTGGAGCAGCTAGTGCCGATTGTCAAGGATGCCATCAAGACC
AAACGGACTGGAGAGCTGTTGGACCGTCTAGACGGCATCACACGTCTGCAGGACCGCAAG
CTGGAGCAGCTGTGTGAGGGAGGACAGGGAGACTACTTGGTGAGCATGCCCAAACTGTCG
CAGATCCGATCCGGAGCCGATCGGCAGCGGGGAGCTCTGCAGGACCTCAATTTCCGTTTG
CAGCAATCAGGAGGACAACTGGTGACACGAAAGAAGCGGCTTCTGGAGGCTCGAACAGTG
CGTGAAAACCTCGACACTGCCATCGAGACCGTCGAGTCGTGTCTACAGGTTCTGGAGCTC
ACCAACAAGACTCACGATCTGATCAAGGCCAAGAAGCACTTTGCAGCCCTCAAATCTTTG
GACGACTTGCAAAACGTGCATCTCAAGGAAGTTTCTGATTACGGATTTGCACGAATGATC
AACGACTCGGTGCCGCAGCTGACGAGCCTGGTGCAGGAGGATGTTGTCAACGACACCTTC
AAGTGGCTTTCGTCTTTGCGATCCGTTTACCCTGCCATTGGTCAGGCAGCCTTCCAGGAG
ACGGAGCGTCTACGCCAGGAGTGGCGGGACGAGGTACACAGGAACCCTGAGCTGGCTCGC
TACAAGTTTAACAGCCCGATCGAGCTCTCCTACCGATCATCCTCTTTCGATCCCATCGAC
AACCATTCTGTTCTTGTCGAGCTGGACCCTCTATACGAGTGTCTGCATATCCACCACACT
CTGCGGAAGACGGACGTGTTTATCAAAAAATTTGATGAGTTCCGACGCTCCCACGTGCAA
AACATTGTGCCTACGGTCGCCAGCATGTCCTCTGCGTCGGAAGACGGAGTTGCCGAGATT
TTGCAGAATCTGGCAGGTTTTTGTATCCTCGACAGAACGATTTCGTCGCGAACCACCAAG
GGTTTCCGTCCTCAATCCGATGTCGACGACCTGTGGATTTCTCTGTCGCAAAAGCTTATG
GGCACTCTTGGCCACGAACTAGCTTCTGTCCAGGACCAAGCAGTGCTCGTCAATCTCAAG
GCCCAGCTGGGTTTGTTTGTGCAGACCATGGAACAATACCGATTCGACACGGTCAACGTG
GGCGACTTTCTGCTTCTGTCGTTCCGAAAGTTCTCCCAGTTTCTCATTTCTGGCTTTGAC
AAGGACTTCAACACCGGAATCATGGAGGACGACACCAACAAGATCACCATTCACGACGCT
GATCGGTATGAGAAGATCACTCGAGCGTGCTGGTGGACTCCAGCGGATGACGAGGCAGCT
GGAGGCAAACCCGGAGCTGCTACAGACGGCGTGTTCCCCAAGACCCTTCCCTTCTCGCCC
ATCTTGCCCCTTTGTTGTGCCAAGATTACGCATCTGATTCACCAGCACTATGCATTTCTG
GACGAGTTCAATGTGTCTGAAGTTACCCAGACGGAGGACTACGTGCAGCAGGCCATGGAT
AGTCTGCTGAATGACATTATCTGCGACACGCTGCTGCATCGGCTTATGACCACGACCCGA
GAGCAGATTGTGCAGATTCTGATCGACCTGCAGCAGTTTGAGCGGGTTATTCCGTTCATT
GCCCAGAGCATTGTGGACGGTCGTCCGTCGCAACGAAAGTCGAAGATTACACTCAAGGCC
CAGAAGAAGTTCCAGCAGGCGTCCGCCAAGGCCGAGTCACGAATATTCGAGCACGTGACC
CAGACGGTGGACAACTTCATGGAGCTCGAGGACTACGATTGGTCGACCACAGTTTCGTCC
GATGAACCTTCCTCATATCTGGACGAAATGGTCAACTTCCTTACGATCTTTTTCAACTCC
ACGCTCGCCGACCTACCCTTTGCCATCAAGAACTACGTCTACTTTGGCGCGTTTGACCAT
TTGGCTTCTTCGTTGTTGCAGATTCTGTTGAATGCGCCCCGGGGCCTCATCACCACCGAG
GCCGTGCACAACTACAACGTGGACATTCAATACATGGAGCAGTTTGTGACGACGCTGCAT
TTGGACGGAGGCAACGCGTCGCTGTCGACCACCTTCATCGAGATCCGACAATGTCTGGAT
CTGCTCATGACCAACGAGCTGTCCAAGGAGTACAATAACCCGCAGATCCGAATGCGACGG
TACGACCGAATCAAGCCTGAGGTCGCGCAGCAGCTCATGGATATGTCGCAGACCATGAAG
CAACCCCAGAGCCCCCAGATTGGAGGCGGTACACAGCAGAAGCCAACTTCGCGGTTTATG
CGAATGTACAGGAATGCGTCTGGTGCACATGAGCCTTGAGCATAGCAAGATGACAGCTTA
TGTACTACTGAACAAGACCACGATATATAGATTAACATGTATGATATGATTGAACATCTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F12969g_CDS-001

Protein length: 1054 aa.
Product: Conserved hypothetical protein

>YALI0F12969g_CDS-001 MSNPYKAAAAAQNDAYGAKAASADPYASDPYASDPYAQDPYASEPATDPYANKSAPDPYA
NNNAAVADPYSAPADPYGNSAPVSDPYAQAAANQAKSSHSDPYASAGGGPRTLQQAPTIT
SKPPPQAQKPPMMRSNTTVPRSPNVTAADFRPRGSPQSATTPSHGRSLSGDIMGASTAPL
NVNKAPAIPSPKASRPPPATTPSRSSTITSGTRSAATTPGRSATMKIPNVSTPPAVPSLT
TKPLTVTKTKPKAKEEPQEPPQDMSLHLQQLMLSTDNVQNNSFSEDFLEQLVPIVKDAIK
TKRTGELLDRLDGITRLQDRKLEQLCEGGQGDYLVSMPKLSQIRSGADRQRGALQDLNFR
LQQSGGQLVTRKKRLLEARTVRENLDTAIETVESCLQVLELTNKTHDLIKAKKHFAALKS
LDDLQNVHLKEVSDYGFARMINDSVPQLTSLVQEDVVNDTFKWLSSLRSVYPAIGQAAFQ
ETERLRQEWRDEVHRNPELARYKFNSPIELSYRSSSFDPIDNHSVLVELDPLYECLHIHH
TLRKTDVFIKKFDEFRRSHVQNIVPTVASMSSASEDGVAEILQNLAGFCILDRTISSRTT
KGFRPQSDVDDLWISLSQKLMGTLGHELASVQDQAVLVNLKAQLGLFVQTMEQYRFDTVN
VGDFLLLSFRKFSQFLISGFDKDFNTGIMEDDTNKITIHDADRYEKITRACWWTPADDEA
AGGKPGAATDGVFPKTLPFSPILPLCCAKITHLIHQHYAFLDEFNVSEVTQTEDYVQQAM
DSLLNDIICDTLLHRLMTTTREQIVQILIDLQQFERVIPFIAQSIVDGRPSQRKSKITLK
AQKKFQQASAKAESRIFEHVTQTVDNFMELEDYDWSTTVSSDEPSSYLDEMVNFLTIFFN
STLADLPFAIKNYVYFGAFDHLASSLLQILLNAPRGLITTEAVHNYNVDIQYMEQFVTTL
HLDGGNASLSTTFIEIRQCLDLLMTNELSKEYNNPQIRMRRYDRIKPEVAQQLMDMSQTM
KQPQSPQIGGGTQQKPTSRFMRMYRNASGAHEP*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG