YALI0F12991g

Overview

Description some similarities with uniprot|P32902 Saccharomyces cerevisiae YHL004w MRP4 ribosomal protein of the small subunit, mitochondrial
Locus type CDS
Locus tag YALI0F12991g

Location

Species Yarrowia lipolytica Positions 1743083..1744456
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1374 (nuc.)
Previous locus YALI0F12969g Next locus YALI0F13013g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F12991g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F12991gYALI0F12991g_mRNA-001YALI0F12991g_CDS-001

Nucleotide sequence

 

>YALI0F12991g
ATGCTGAGATCTATCCGACGGTACTCAACCAAGTCGCCGTTCGCCAAGGTCGGCTCCAAG
ACCCAGTCCTACGACTACCTGCGAGCGTTGCGGGTCACCCCCGCCGAGACTTTTGCCGAT
GTCCCTCTGTCTCCCGAGCTGGAGCAGGAGCTGTCCACCAAGTTCCAGGAGTTCCAGAAG
GCTCTCAAGGCCGGTGAGAAGCTGGAGCAGGTCAAGGAGATTGCACGACAGGCAAGAGGC
ACCAAAAACGCCGCTGCCGGCGGGGACCCCCAGGCCGATCTGTCTTCCCTGATGGGCCGA
ATCGACAGTAAGAACATCCGAGTGGGTAATGACCAGAGTAAGATTGCTGCCATTTTCCCG
TTGCTCAAGCGAACCGCCCGAGATGAGGAGTACACCAAGCAGGAGCTGTTTCTGCGACGA
CAGCACCGACACGATATGCTCAGCAAGTTGGGAGCCGAGGTCAAGGGCGTCTACGATCCT
CTCCATATCATCAAGCATCCCAAGAGTGGCACCGAGGCCACCGTGACCAGTCTTCTGGCT
GCCGGCGCTCATCTGGGCCATGCCGTCGAGCTCGGTCACGTCAACAACCAGCCTTTCATC
TACGGCGTTCGAGACGGCATTTCCATCATTGATCTTGAGCAGACCGTCACCCAGCTGCGA
CGAGCTGCTCGAATCACCGAGGCTGTTGCCAAGCAGAACGGTCTGATTCTGTTTGTCGGC
ACCCGTGACGGCCAGAAGCTGGCGCTCGAGGCCATGTCGCGACGATGCGGCGCTTCCTAC
GTGCACTCCAAGTGGATTCCTGGAGCCATCACCAACTTTTCCAACATTGCCGCCAACTGG
AAACGATACGAGGTGGTGGACGGCGAGTCTGGAACCAGCTTTGCCGACATCAACCAGCAC
ACTGGCCGAGAGTTTGACGCAGAGATCTCGGGCCCTAACATGCGACCTGATCTGGTTATC
ATCCTCAACCCCGACGAGAACCCCGCTCTGATCCGAGAGTGTCTCAAGTCCTGCATCCCC
ACTGTCGGAGTGGCCGACACCAACTTTAACCCTTCCAAGCTGTCGTACCCCATTGCCGCC
AACGATGACTCTCTCCGAACCACGGATCTGATCACTGGAGTGCTGGCTCGAGCAGCCGAG
AAGGGACACAAGCTGCGACGGTTCGAGGAGCAGCAGCGACGAAACGCCGAGCTTCTGCAC
ATGAAGAAGAATCTTGTGCAGGCTGCCGATGAAAATGACGTGACCGAGGACCCTTTCTCC
TCCGGAGAGGCCCACAAGGAGTAATGTACATATAGGAGACCATGAATGAGAGGTATTCGC
GAGAATGCCAGTGTATTGAATAACAGAATGACACTGTGACCCTCGAGCAGATCG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F12991g_CDS-001

Protein length: 428 aa.
Product: Conserved hypothetical protein

>YALI0F12991g_CDS-001 MLRSIRRYSTKSPFAKVGSKTQSYDYLRALRVTPAETFADVPLSPELEQELSTKFQEFQK
ALKAGEKLEQVKEIARQARGTKNAAAGGDPQADLSSLMGRIDSKNIRVGNDQSKIAAIFP
LLKRTARDEEYTKQELFLRRQHRHDMLSKLGAEVKGVYDPLHIIKHPKSGTEATVTSLLA
AGAHLGHAVELGHVNNQPFIYGVRDGISIIDLEQTVTQLRRAARITEAVAKQNGLILFVG
TRDGQKLALEAMSRRCGASYVHSKWIPGAITNFSNIAANWKRYEVVDGESGTSFADINQH
TGREFDAEISGPNMRPDLVIILNPDENPALIRECLKSCIPTVGVADTNFNPSKLSYPIAA
NDDSLRTTDLITGVLARAAEKGHKLRRFEEQQRRNAELLHMKKNLVQAADENDVTEDPFS
SGEAHKE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG