YALI0F12947g

Overview

Description weakly similar to uniprot|O13827 Schizosaccharomyces pombe Hypothetical protein C19A8.11c in chromosome I
Locus type CDS
Locus tag YALI0F12947g

Location

Species Yarrowia lipolytica Positions 1737259..1738308
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1050 (nuc.)
Previous locus YALI0F12925g Next locus YALI0F12969g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F12947g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F12947gYALI0F12947g_mRNA-001YALI0F12947g_CDS-001

Nucleotide sequence

 

>YALI0F12947g
ATGCGAAACAAGATCCTCGTTGTCGGCCCTCCTGGAAGTGGCAAGCTGACCATGCTCAAG
GAACTCATGGGCACCGTGTCGCCTGTGACAGGATCCCACGCCGGCATTATCGAAGAGTAC
CACATCAAAAACAAGTACTACGAGGCCCGCGTCGGGGTCTGGGTGGACGAGTTTTTGTTG
GAAGGTGACTCGACCCAGCTCTCCGCAGACCGAATCGAAGGACTAGTGTCGCTGCCGGAA
TGGACGGAGTCCTTCTGCAGCAACGAGGCCAAGGAGGTCCGAGACTCCATCAAGGCCGTC
GTCTTCACGCTGCGCCACGGCTCCGACGCGGCCCATCTTGAACCCCAGCTCAAGGTCCTC
GAGCAGCTCGTGGGCATGCTGGACAACGACAACTGGGACGGGTCGTTGATCTGCCTGCAA
AAGGGACATGTCAGCCCCGAGCTCGCCGCCCAGCTCGACGCCGTCTGCTTCGACTATGGC
TTTGAATACATCAGCCACTTGGTGTCGGAGCAGGGCGAGACTACAGGTTATGACCGTCTA
CAGGAAGCCATCGAGGTGCTCGGATGGGAGACCCAGGATGAGGCCAAGGAGACGCCTGTG
CCTGATCCTATTCTCACGTCGCCTACACTAATGGCCCGGTCATCGCCGTCGTTACACGCG
TCGTCCTTTGACGCCCGGTCGTTGTCGCTGTCACCAGCCGACTCAGACATGCTCAAGGGC
TTGCTCAACGACGACCTAGACAACTTTCAGAACATCTTTGATAAGCTGAAAATTGCCCGA
AATTCCAATCTCAGCGACGAGCAGCGAACTCGGCTGGCCAACGACCTGGCAGAGCAGCTG
ATTGGAGGAGAAGTTCCCGGACACTAAGGTGCCGGAACACAGCATGGGAACCGGGGGAGA
ATAAATTGTTGGCCGAAACGCCAGCCAAGAGTTCTTGTCGAGAGGCAAGACTCGAAAGCA
AAACGAAAGGTCGATCTCTGGCGGATGGCTTTATGCAACCAGCCGCATCTACATATGTAC
ACTATTGACATCTTTTCTGATGAGAATGTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F12947g_CDS-001

Protein length: 289 aa.
Product: Conserved hypothetical protein

>YALI0F12947g_CDS-001 MRNKILVVGPPGSGKLTMLKELMGTVSPVTGSHAGIIEEYHIKNKYYEARVGVWVDEFLL
EGDSTQLSADRIEGLVSLPEWTESFCSNEAKEVRDSIKAVVFTLRHGSDAAHLEPQLKVL
EQLVGMLDNDNWDGSLICLQKGHVSPELAAQLDAVCFDYGFEYISHLVSEQGETTGYDRL
QEAIEVLGWETQDEAKETPVPDPILTSPTLMARSSPSLHASSFDARSLSLSPADSDMLKG
LLNDDLDNFQNIFDKLKIARNSNLSDEQRTRLANDLAEQLIGGEVPGH*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG