YALI0F07513g

Overview

Description some similarities with uniprot|Q26079 Placopecten magellanicus Myosin heavy chain and other Myosin heavy chains
Locus type CDS
Locus tag YALI0F07513g

Location

Species Yarrowia lipolytica Positions 1080174..1083820
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 3647 (nuc.)
Previous locus YALI0F07491g Next locus YALI0F07535g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F07513g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F07513gYALI0F07513g_mRNA-001YALI0F07513g_CDS-001

Nucleotide sequence

 

>YALI0F07513g
ATGCCGACCGGAGATACCGTGTCGTCCGAGCCGACGCAGTCCGCCAACCTGTCCGACGGC
TCGGTCATTGCACAGCCTAACGCGGCCGACGACTCCCCAAATGCAGACCATTCCAACCTC
ACCACAGACCCTGGTTCCTCGTCTCCTGGCGGGTTTGAAATGTCGTTTCAGGATGACGAG
TACCTAACCATGTTCAACAACCTCAAACTGGATGTCAAGAGCGGCAAGCGCGACATTACA
CAGAGCGTCAGCGCCCAGGATAGTTCTCTCAATGCATCTTCCAACGTCACCGAGGATTAC
TCTGGAGCCGGTTTCGAAACTCTGGACTTCGAAGACATGCCTGCAGAGTTCGAAGCGATT
CCGGGCGCGTCTCCGGCCTCACACTCGTCTCTGGAGTCGTCCGGAGAACCCAGCAAGGTC
ACAGATCTCGGAAGCACAGACACAAAACAAACCCCTGACACATCAACAGCCAGCACCAAA
GCCAAGCAAATGGTGGAGACGGCAACAGCAGCGACAACTACAACAGCAGATGACAAGGAG
AATCGTGAAATACCCGTTTCTGAACAAAGTTCTGTTTCTCAGCTACCTAATGCTTTCATT
CCCGAGCGAACGTCGTCATTATCTCCTCTGGCTAGGAAGAAGACCCCCAATGTCGCCCCC
ACATCTTCTTCTGGCTCCCCTCTTGCATCGAAAGGCATGTCGTCTTTCCAGACAATTTCT
CCTCCGCGTGAAATGTCGTTCAACAGCGTCATTAGACACTCCAGCATGCACACCGACAGC
GTCATCCACCACGGAGTTGCAACCCTGGAGGACGTAGATCTCGGATGCGACACCGACCTC
GAGTCCCCTCCCTCTCCGGAACATTTTCACATGAAGTCTCTAGACGACAACATGTTCAGC
GTCCCTGCCACTCTCGACGACAAGACTGTTCTGGGCGTTAAGCAGGAACGGGCCCATGTC
GACAAGCTGGTCAACGACAAGTTCAACCTCCAGGTCGAGAATATGATGCTGCGAAACAAT
TTGAACCGAGGCGAGGGAGGATCTCAGGCCGGAGGCGTGGATGCTCTGAAACGAGCTATC
CGCGAGAATAACGAGATGAAGGAGAAGATTGAGCAGATGGAGAAGGAGCTGTCGCGCAAG
CGAGACGGCGGTATCGATTCGGAGGAGATCAGGGAGCTCAAGGAACGCGTCGTTAACTAT
GAAGAGCAAATTGAGTATCTCGAGGGCAAGCAGCAACAACAGCAGCAGCAAGACTGGGAG
GACATGCGCTCCAGTAGCAGTGCATTTGGTCGTTCGAGCCGGCTGAGTGGTTCACGTGCA
CCCTCGCGAGGAGGTGTGCCCCCCAACAATCATTTCATGTCCAACAGAAGCATATCTCGC
CAGTCCTTTGTTTCTGACGGTGGCAGTGGAGGTCCTGGCGGTGCTACACATCGGCAGTAC
AGCCACACGCCTCCTCTGGTCCACAGCAATCGCCACTCTCAGCATATTGACACGGATGAG
GCTCATGTTATGGACCAGATGCACAAGCTGCAGAATCTGATCGATCCTGATGGACATGCT
GATTCTGAGACCGATGAGGACTCTATCTACTCGCGGTTCTCCTCCTTCCTGACCATCATC
ACGCAGTACATTGTTGCTCAACAGGAAAAGTTCCGGCTTACGGAGCAGGAGTTTCAGAAT
CTCGAGCAGGACTACGAGGATATCCAACTGCGAGTCGCCCAGGAGTCTGCTGAGGAGATT
GAGGCGCTGAGAATTGAGATAGAGAATCTGCGTAACGATTTCTCTAGTCAAGAACAAGAG
AACGACAACTTACGTCACGAGCTGAGCCAGCACCGCGAGGAGGCGCGGCATTATGAACGG
GAAATTCTGGCGCTGTACCCTGACATTCAGACGCTGGAAAACAACAACAAGCGGCTGAAG
AAGGACGTGGAGAAGAAGACCCGGTCACTGGTGGAGATGGAGGAGCGGCTACAGGGTATG
GACGCCGAGCTGCAGCGTGCGACGGAGCTCAACGAGGAAATTGGTGCGTTTGCGGGCAGC
CTAGAGGAGCAGCTTGAGGAGCTTAAGACAGGAGGAGTAGATGAGAAGGAGGTAGAGAGA
GTCAAGGGCGAGCTGGAGAAAGTACGGCATGAGCTGGAAGTTGCCACTGAGCAGGCAGGT
GTGGCCAAGAAGGATGCCGACACTGCTCGGATGGAGCTTGCCGGAGTCAAGCGAGAGCGA
CAGGACCTTCAGAGAGAGTCTGATACTCTTAGGGAAGATCTGGAGACTCGAAACGTGGAG
TTGGGTACTCGCAATGTCGAATTGGAAACTAAGAAAGTGGAGGTCTCTTCCCTGACTGCT
ACGGTTGAGTCTCTGAAGGCAGAGGTCTCTTCTCTCCAGGCTAGCATGAACCAGATTGCT
ACAGTCATGGTCGACCACGACATTGATGTGGAGGCTATGACTATCCCACAGCTTGTACTT
GAGCTGCTGAATGAGCGGCAAGCACTGCATGTTCGGATCAGCGAGCAGGAGTCCATTTCG
CGTTCTTCTGCCTCTGAGCTTGAGCAGAAGCTCACAGAGACAACCCTCCAACTCCAGCTG
CGTGAACAGTTCACCGACGATCTCGAGGCACAACTGGACGATGCTCTTAGTCGAATTGAG
CATATGGGCAACCACGAGGCCCGAGTGATGGAGCTAACTAGGCAGCTCACCCAGTTTGAG
GAACAGTTCTCCAACGACAGAAAGCACAGCGAGATGGAGAAGGCCAAGCTGGAGGCTCAG
ATCAAGCGTGTGCAAGCTGACTCGGATCTGCGGTCTGCAGCCCACCAGAAGCAGCTGTCG
TCATGGCAGAAGAAGCTGTTCAACGTAGAGTGCAACCGAGGGGACTTCTCGAAATCCATC
ATCGAGAAGCTGGCTAACATCCTTGGCCCTGTGTGGAAGGATGCCCATGACGACGACCTG
TCCAAGCTGATGAAGGCCAATAGCACACCGTCGGCTGAGGTGGTAACCAAGCTGTCAAAC
GATGCTCTGCATGACCTTGGCCGATTGGTGAGTAAGGGCAACTCGGAGATCACAAAGCAG
CTGCATCAGCTGCGAATTGAAGTCGACTCTCTCAAGTACAAGAACAACAAGCACGAGGAG
CAATACCGGTCGCTCAGCAACTTGTACAAGAAGGCTGGCCTGGAGAGAGACGACTACAAG
AAGCGGTTGGCGCAAAGCGAGGAGGACAAGAAGCAGCTGGGCGATCAGCTAGAGCGGACT
TCTCCACGACGAAAACTCGGCAGTGGAATCAGTTCGGCTAGCATCTCGTCGCTGGGTTCG
GACGAGGAGGATCTCGGACGGGTACAGGTGACTGCGCGGGAGATTGACTCTCACCAATCT
CATGCTTCGCCGATGGGCAAGCCGTTCTCGTCTGTCCTGTGGGGTATTCGAAACGAAGAC
ATTCAGCAGCGTCTCAAGCTGGAGAAGGAGATGAGAGCGTCCGACAAGGCTGCCGCCGAT
AAGAAGATCAAGGAGCTGGAGGATGAGCTCAATGAGGTCTACCGGCGAGAAGCTCAAAGG
GAGAGAAACTACTAGATCTGGGGATGGGAAGGAGATGTGTGTAAATAGTGAGTGTATATT
ATGTAATAGTCGGGGAAGTGGAGCATTATATGTGCTACTTGTATATG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F07513g_CDS-001

Protein length: 1185 aa.
Product: Conserved hypothetical protein

>YALI0F07513g_CDS-001 MPTGDTVSSEPTQSANLSDGSVIAQPNAADDSPNADHSNLTTDPGSSSPGGFEMSFQDDE
YLTMFNNLKLDVKSGKRDITQSVSAQDSSLNASSNVTEDYSGAGFETLDFEDMPAEFEAI
PGASPASHSSLESSGEPSKVTDLGSTDTKQTPDTSTASTKAKQMVETATAATTTTADDKE
NREIPVSEQSSVSQLPNAFIPERTSSLSPLARKKTPNVAPTSSSGSPLASKGMSSFQTIS
PPREMSFNSVIRHSSMHTDSVIHHGVATLEDVDLGCDTDLESPPSPEHFHMKSLDDNMFS
VPATLDDKTVLGVKQERAHVDKLVNDKFNLQVENMMLRNNLNRGEGGSQAGGVDALKRAI
RENNEMKEKIEQMEKELSRKRDGGIDSEEIRELKERVVNYEEQIEYLEGKQQQQQQQDWE
DMRSSSSAFGRSSRLSGSRAPSRGGVPPNNHFMSNRSISRQSFVSDGGSGGPGGATHRQY
SHTPPLVHSNRHSQHIDTDEAHVMDQMHKLQNLIDPDGHADSETDEDSIYSRFSSFLTII
TQYIVAQQEKFRLTEQEFQNLEQDYEDIQLRVAQESAEEIEALRIEIENLRNDFSSQEQE
NDNLRHELSQHREEARHYEREILALYPDIQTLENNNKRLKKDVEKKTRSLVEMEERLQGM
DAELQRATELNEEIGAFAGSLEEQLEELKTGGVDEKEVERVKGELEKVRHELEVATEQAG
VAKKDADTARMELAGVKRERQDLQRESDTLREDLETRNVELGTRNVELETKKVEVSSLTA
TVESLKAEVSSLQASMNQIATVMVDHDIDVEAMTIPQLVLELLNERQALHVRISEQESIS
RSSASELEQKLTETTLQLQLREQFTDDLEAQLDDALSRIEHMGNHEARVMELTRQLTQFE
EQFSNDRKHSEMEKAKLEAQIKRVQADSDLRSAAHQKQLSSWQKKLFNVECNRGDFSKSI
IEKLANILGPVWKDAHDDDLSKLMKANSTPSAEVVTKLSNDALHDLGRLVSKGNSEITKQ
LHQLRIEVDSLKYKNNKHEEQYRSLSNLYKKAGLERDDYKKRLAQSEEDKKQLGDQLERT
SPRRKLGSGISSASISSLGSDEEDLGRVQVTAREIDSHQSHASPMGKPFSSVLWGIRNED
IQQRLKLEKEMRASDKAAADKKIKELEDELNEVYRREAQRERNY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG