YALI0F07535g

Overview

Description weakly similar to uniprot|P40552 Saccharomyces cerevisiae YIL011W (ohnolog of YOR010C) TIR3 cell wall mannoprotein; member of Srp1p/Tip1p family of serine- alanine-rich proteins
Locus type CDS
Locus tag YALI0F07535g

Location

Species Yarrowia lipolytica Positions 1085604..1086500
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 897 (nuc.)
Previous locus YALI0F07513g Next locus YALI0F07549r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F07535g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F07535gYALI0F07535g_mRNA-001YALI0F07535g_CDS-001

Nucleotide sequence

 

>YALI0F07535g
ATGGTTGCCATCCGATCCACTCTCTCCGTCGCCGCTCTCGCCGCTGTCGTCCAGGCCGCT
GGAAACCCCATCATCGCCTCTATCGCCAACGACGTTGTCGAGGGTATTGCTGCCGCCAAG
ACCGACGACTCCCTCTCTGACGCTGATGCCACCTCCGAGATCCAGGCTGTTGTTGACATC
GTCACCAACAACCCCGATGTTGGCGCTCTCTTCACCGCCGCTGTCCCCGTTATTGCCATC
GGCCTTGACGAGACCAACTTCCCCTCTCTGCTCGACGCTGCCTCCAAGACTCTTGATGTC
TTTGAGGGTTCCGACGACTACAAGAAGGCTGTTGAGGGCTTCAACGCCGCCTTTGAGCAC
TACGATGTCCCCCAGGCTCTGTCCAACATCATCTCCAACATCGGTGCCGTTCTCGCCATT
GTTACCCCCTCTCTCCCCTCTCTGACCCCCGAGTTCTCCGACAAGTGGGAGACCGCCACT
TCTCGAGTTCTCGAGCTCGCCACCTCTCTTGGTATCCTCGGTGGAGGAAAGCCCAAGGTT
GCTGAGGCCACTTCTGCTGCTGCCGAGGCCACCTCCGCTGCTGCCGAGGCCACCTCCGCT
GCTGCCGAGGCCACCTCCGCCGCCGCCGCTCCCTCTTCTTCTGCCGCCGCCGCTAAGGAG
TCTTCTGCTGCCCCCGCCAAGGAGTCTTCTGCCGCCCCCGCCAAGGAGTCTGCTGCCCCC
GCCAAGGAGTCTGCTGCCCCTGCCAAGGAGTCTGCTGCCCCCAAGGAATCTGCTAAGGCT
TCCGCTGCTCCCGCTGCCGCCTCCAAGGCTCCCCAGCAGGCCAACGGTGCTTCTGCCTTC
AACGTCCAGCTCGCCGCTGGTGTCGCCATTGTTGGTGCCGTTGCCGCTCTCATCTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F07535g_CDS-001

Protein length: 299 aa.
Product: Conserved hypothetical protein

>YALI0F07535g_CDS-001 MVAIRSTLSVAALAAVVQAAGNPIIASIANDVVEGIAAAKTDDSLSDADATSEIQAVVDI
VTNNPDVGALFTAAVPVIAIGLDETNFPSLLDAASKTLDVFEGSDDYKKAVEGFNAAFEH
YDVPQALSNIISNIGAVLAIVTPSLPSLTPEFSDKWETATSRVLELATSLGILGGGKPKV
AEATSAAAEATSAAAEATSAAAEATSAAAAPSSSAAAAKESSAAPAKESSAAPAKESAAP
AKESAAPAKESAAPKESAKASAAPAAASKAPQQANGASAFNVQLAAGVAIVGAVAALI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG