YALI0F07491g

Overview

Description similar to uniprot|P39722 Saccharomyces cerevisiae YAL048c GEM1 Outer mitochondrial membrane GTPase, subunit of the ERMES complex
Locus type CDS
Locus tag YALI0F07491g

Location

Species Yarrowia lipolytica Positions 1077992..1080137
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2146 (nuc.)
Previous locus YALI0F07469g Next locus YALI0F07513g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F07491g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F07491gYALI0F07491g_mRNA-001YALI0F07491g_CDS-001

Nucleotide sequence

 

>YALI0F07491g
ATGACCAACGATGTCATCCGGATTGTCGTCTGTGGAGACGAAGGTGAGTTTCTTTTACCA
AGTCATTTGTGGCGCATACTAACACAGGCGTGGGCAAGTCCAGGTGAGTGAAACTCCGTC
TTTCATTACGCTCAAGACACAGCTAACACAGTCTGATCACGTCTCTCATCAAAGACACTT
ATGTTCCCAATATTCAGAAGCTGCTGCCGCCAATAACGATCCCCAAGGGTTTCTCGTCTT
CACCTGATGCGCCATTGTCGACTGTCATCGTCGATACACAGTTTTCCAATAGTCCAGCAG
AGGCCGAACATCTGCACCGAGAGATTCGACAGGCCAACGTCATCTGGCTCGTCTACAGCG
ACCACTACTCGTGCGAACGGGTCTCCATCTTTTGGCTGCCATATTTTCGAAACCTTGGAG
TTAACCTGCCCATTGTTCTGTGTGCCAACGTCTTTGACGATGTCGATAGCTGGAACTCGA
GAGACAGCGAGCGGATTATCTCCGACGAGATGATTCCGATCCTGCGTGAATTCAAGGAGA
TAGAAAGTTGCATCCGAGTGTCGGCTAAGCTCAACCACAACATCAACCAGGCCTTTTACC
TGTGTCAAAAGGCTGTTATGCACCCCATCGCTCCGTTGTTTGATGCGAAAGAAGGCAAGC
TGAAACCCAACGCAGTTGCTGCGCTTCAGAGAGTGTTCTTCCTTAGCGATAGAGACCAGG
ACGGTTACCTGTCCGACCAGGAAATGCTGGAGCTGCAGGTCAAGTGTTTTGGACGAAGTT
TTGATGCTACTGATCTCATTCAGATCAGAGCTCAGCTGGCCAAGATCAACCCTGCTCTAG
CTACAGAAAGAGGCGTATCAGAGGAAGGATTCATTACTCTCAACCGTCTTTACGCAGATA
AGGGCCGTCACGAGACCACATGGGGAATTTTGAGAACGTTCCATTACACCGACTACCTGT
CTCTATCTGATCAGTTTCTGTACCCCAAGCTCGACGTGCCTGAAAATTCGTCGGTAGAGC
TATCTCCAGAGGGATACCGGTTCCTGGTGGATCTCTTTTTGCTGTTTGACAAGGATAATG
ACGGTGGTTTGAACGACTCAGAGCTTAAGACACTATTCAAGCCAACCCCTGGAATCCCAC
AAAAGTGGCTGGATTTCAACTTCCCCTACACCACCGTCCACGATGAACAGGGCTCCATCA
CCCTGCAGGGTTGGCTAGCACTGTGGAGCATGACCACCTTTCTAGACTACAAAACTACCA
TGGCATACCTTGCTTATCTTGGATTTGAGGGTGACAACAGCAAGAAGCGATTCAGTGGCT
CATCTGTGACCGTTGCCATGACTACTGCCGCCGCTGCTGCTGCTCGTTTGACTGCTTTCA
AGGTCACAAAGCCGAAAAAGCGACGATCTCGACCTCGACCATATTACAGAGCCACTCCCA
ATGATAGATCTGTGTTCAACTGTTTTGTGTTGGGCTCTCATATGTCTGGTAAGACATCTC
TGCTGGAAGCTTTCCTCAATCGACCTTTGATGACAGATATCTATAAACCCACTATACGCC
CTGTGTCTGTAGTCAACTCGGTGGAAATGACAGGAGGCAAGCAGTGCTACATGGTGATGG
AAGAGCTGGGACAGCAGGAGGCGGCAGTCTTGTCCAACGCCGCTCGGCTGGAAGAATGCG
ATGTGATATGTTACACCTATGACTCCTCAGATCCAAACTCCTTCTCATATATTGATGGTC
TGCGAAGAAAGTATCCCGTGCTAGACACTCTTCCGTGTGTCTTTGTGGCTCTCAAGGCCG
ATAACGATAGACAGCAGCAGCGGTTTGACCTGCAGCCTGACGAGTATACCAAACAGATTC
GAATTGCGGCTCCTTTGCATGTCTCTTCCAAGTGGCCCTCGTCGGTCACTGAGCTATTCA
TCCAGCTAGCAGAGGCTGCCCAACAGCCTGGACGAGGCCTTCCTAATCAGGATCCGGAAG
AGGAAACTAACACTATTATGCCATTTGCTCTAGCTGGGGGAGCTACAGTACTGCTGGCAG
CTGCCGTAGCATGGATCTTCAAAAACGTTCGAGTTGCTGGCAGAGAATAGATACACGCAC
CGTGCTGCAATCACTTCCATTGTAATATATTCACTTTCGACTTTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F07491g_CDS-001

Protein length: 666 aa.
Product: Outer mitochondrial membrane GTPase, subunit of the ERMES complex, putative

>YALI0F07491g_CDS-001 MTNDVIRIVVCGDEGVGKSSLITSLIKDTYVPNIQKLLPPITIPKGFSSSPDAPLSTVIV
DTQFSNSPAEAEHLHREIRQANVIWLVYSDHYSCERVSIFWLPYFRNLGVNLPIVLCANV
FDDVDSWNSRDSERIISDEMIPILREFKEIESCIRVSAKLNHNINQAFYLCQKAVMHPIA
PLFDAKEGKLKPNAVAALQRVFFLSDRDQDGYLSDQEMLELQVKCFGRSFDATDLIQIRA
QLAKINPALATERGVSEEGFITLNRLYADKGRHETTWGILRTFHYTDYLSLSDQFLYPKL
DVPENSSVELSPEGYRFLVDLFLLFDKDNDGGLNDSELKTLFKPTPGIPQKWLDFNFPYT
TVHDEQGSITLQGWLALWSMTTFLDYKTTMAYLAYLGFEGDNSKKRFSGSSVTVAMTTAA
AAAARLTAFKVTKPKKRRSRPRPYYRATPNDRSVFNCFVLGSHMSGKTSLLEAFLNRPLM
TDIYKPTIRPVSVVNSVEMTGGKQCYMVMEELGQQEAAVLSNAARLEECDVICYTYDSSD
PNSFSYIDGLRRKYPVLDTLPCVFVALKADNDRQQQRFDLQPDEYTKQIRIAAPLHVSSK
WPSSVTELFIQLAEAAQQPGRGLPNQDPEEETNTIMPFALAGGATVLLAAAVAWIFKNVR
VAGRE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG