YALI0F05544g

Overview

Description highly similar to uniprot|P05755 Saccharomyces cerevisiae YBR189W (ohnolog of YPL081W) SUP46 ribosomal protein
Locus type CDS
Locus tag YALI0F05544g

Location

Species Yarrowia lipolytica Positions 827761..828699
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 939 (nuc.)
Previous locus YALI0F05522g Next locus YALI0F05566g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F05544g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F05544gYALI0F05544g_mRNA-001YALI0F05544g_CDS-001

Nucleotide sequence

 

>YALI0F05544g
ATGCCTCGTAAGTACACTCTTATGACGAACTGCTGTCACTGTCATTATAACTGACTGGGG
TTGGTTATTTGTTACATGGTTGTTCAGCTGGGCGAGTTGTATCGGTCGATATCGGTCGGT
ACAATCTCTCCAGCCAGAGTGATTATGAGCATCGTTTGCTGCTGCTACTACTACTACCCC
GACGTTTGACAGTGATACCAAATCGAAATACCTGGTGAAGGGTCACGTGTGAGAACCACC
ACTATGGTGGGTCCGCTCGGCGACCTACAGCCTCCTACGCTCAGTACTAACAACAGGAGC
CCCCCGAACCTACTCCAAGACCGCCTCCACCCCCAACCGACCCTACGAGTCTGCTCGTCT
CGATGCCGAGCTCAAGCTCGACGGTGAGTTTGGTCTCAAGAACAAGCGAGAGATCTACCG
AATCGGTCTCCAGCTGTCCAAGATCCGACGAGCTGCCCGAGAGCTGCTTACCCGAGACGA
GAAGGACCCCAAGCGACTTTTCGAGGGTAACGCTCTGATCCGACGACTGGTTCGACTCGG
TGTTCTTCCCGAGGACCGAATGAAGCTCGATTACGTTCTGGCTCTTTCCCCCGAGGATTT
CCTCGAGCGACGACTGCAGACCCAGGTCTTCAAGCTCGGTCTGGCCAAGTCCATCCACCA
CGCCCGAGTGCTCATCTCTCAGCGACACATCCGAGTCGGCAAGCAGATTGTCAACGTTCC
TTCTTTCATGGTTCGACTCGAGTCCCAGAAGCACATTGACTTTGCCCTCAACTCTCCCTA
CGGAGGAGGACGACCCGGCCGAGTTAAGCGAAAGAACGCCCAGAAGGGTGCCTCCGAGGA
CGCCGAGGAGGAGGAGGACGAGGAGTAATCGTCTTCTTCTTTTCTAGCTCAAAAAGTATC
GAAAGATTAATAAAAATGCATGTTTAGTGTGCCCAATTC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F05544g_CDS-001

Protein length: 193 aa.
Product: Ribosomal 40S subunit protein S9, putative

>YALI0F05544g_CDS-001 MPRAPRTYSKTASTPNRPYESARLDAELKLDGEFGLKNKREIYRIGLQLSKIRRAARELL
TRDEKDPKRLFEGNALIRRLVRLGVLPEDRMKLDYVLALSPEDFLERRLQTQVFKLGLAK
SIHHARVLISQRHIRVGKQIVNVPSFMVRLESQKHIDFALNSPYGGGRPGRVKRKNAQKG
ASEDAEEEEDEE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG