YALI0F05522g

Overview

Description highly similar to uniprot|Q12672 Saccharomyces cerevisiae YPL079W (ohnolog of YBR191W) URP1B ribosomal protein L21
Locus type CDS
Locus tag YALI0F05522g

Location

Species Yarrowia lipolytica Positions 825371..826238
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 868 (nuc.)
Previous locus YALI0F05500g Next locus YALI0F05544g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F05522g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F05522gYALI0F05522g_mRNA-001YALI0F05522g_CDS-001

Nucleotide sequence

 

>YALI0F05522g
AATAATCAACAATGGGTAAGAGGTAAGTTCTTGCGATTTGAGGGATGAACGGACGGCAGT
ATGACTGTCAGGGTGAAGTGGGCGTTTGGGAATAGAGCGGACTCGGGAGGCTAGGCGTGG
GGGCATTATGGGACGTTGTTTTAGAGAGGCCATGGGATCGAGGAGAAGCCTGTGTTCTTC
CGATAATCCAGTGCCCGGAGTGCCTTCTATGTCTCGCGCTCGGCTCAGCTCAGCTCAGCC
CAGACAGACAGTCTGTCTGTCAAACCACACCACCGACTCACACTAACTCAGTCACGGATA
CAGAAGCAGAACCCGATACATGTTCTCTCGGGACTTCAAGAAGAACGGAACTATCCCCAT
GTCCGTCTACTTGAAGACCTACAAGGTTGGAGACATTGTTGACATCCGAGCCAACGGTTC
CATCCAGAAGGGTATGCCCCACAAGTTCTACCACGGCCGAACTGGAATCGTCTACAACGT
GACCAAGTCCGCTGTTGGCGTCATCATCAACAAGGTTGTTGGCAACCGATTCATGGAGAA
GCGAATCAACCTCCGAATCGAGCACATCAAGCACTCCAAGTGCCGACAGGAGTTCCTTGA
CCGAGTCAAGGCCAACGATCTCAAGCGAAAGGAGGCCAAGGCCAAGAACGAGATTGTCCA
GCTCCGACGACAGCCCGGCGCCACCCGAGAGGCCAAGACCCTTGCCATCGACGAGACCAA
CTACCCTCTCACCGTTGCTCCTCTTGCTTACGAGACTTTCATCTAAGCGGTCGAGAGTGA
CATAATAAAATTGTATCTTATTAGGAGACTCCAGTATTTGTAGTGAAGTGAGTGAAGTGA
GTGAAGTGAGTGAAGTGAAGCGATACTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F05522g_CDS-001

Protein length: 162 aa.
Product: Ribosomal 60S subunit protein L21, putative

>YALI0F05522g_CDS-001 MGKSHGYRSRTRYMFSRDFKKNGTIPMSVYLKTYKVGDIVDIRANGSIQKGMPHKFYHGR
TGIVYNVTKSAVGVIINKVVGNRFMEKRINLRIEHIKHSKCRQEFLDRVKANDLKRKEAK
AKNEIVQLRRQPGATREAKTLAIDETNYPLTVAPLAYETFI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG