YALI0E32571g

Overview

Description similar to uniprot|O74689 Emericella nidulans NUDE Nuclear distribution protein
Locus type CDS
Locus tag YALI0E32571g

Location

Species Yarrowia lipolytica Positions 3866718..3868154
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1437 (nuc.)
Previous locus YALI0E32542g Next locus YALI0E32593g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E32571g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E32571gYALI0E32571g_mRNA-001YALI0E32571g_CDS-001

Nucleotide sequence

 

>YALI0E32571g
ATGACCGATATCGACACTCCTGCGTCGCCTTTGACGCCCAACTCCAAGGCACACCTCGAG
GTGATTGCATACAACCAGTACCTCCAGGCCAAAGAGCAGATCCAGCAGCTGGAACACGAG
CTGACGGAGTTTCAGGAGTCATCCAAGGAGCTGGAACTCGAACTGGAGCAGGAACTGGCT
GAAAGTGATAAGCGACAGGCCAAACTAGAGGACAGAATTAGCGCACTTGAATCCGAGGTT
ACGGAATGGAGAAAGAAGGCTCTGGACGCCCATAAGGAGGCAGCCTCTACACAACAGGCT
CTACAAAGAGAAGTGAGCAGTCTACGGGACGCCCACAAGCTGGTGAAGGAACGGCTGAGA
GAAACGGAGAACGCCAACGACGACATTGAACAACGGGAACGAATCACATGCTCCACCCTG
GAAGATATTCAGACTCGCTACAATGAAGCATTGGAGAACGTGGCAATCCTGGAAGCTGAA
CTAGCAGCCAAGGATGTGCTGATTGGAGAGCACCACCGGGCCAAGGAAGAGATAAAGGAT
CTGACAGAGGAGCTGGAACACACCAGAAAGAAACTGGCGATCCGGGATCAAGAGCTGGAG
GATGCCAACAAGCGAATCATGAACCCTCCTCCAGCGACAAACCACAACGCCACCACGCAC
CGACGGGCTGTTTCTGGAACCGCCCAGGTCTCGGCAGAGGGTTACCTTACCCCCCTTACT
TCTACAGGGGCCAAACCGCTGTCATCATCAAGATCTATGCAGTTCATTCATGGTCTTCAG
TCTCAGATGCGGTCTCTGGAGTCACGTGTTGCACATGTCAAATCGTCCTTGCCTAAACCG
ACCACTCCAAAGCGTGCCAAATCTTCAGCTTCTGCTGTATCGGGAGCTTCTACTATCAAG
AGTTCACCCAGTATGGCTCTTCTGACGCGTAAACTGAGTGAAGCAGACGATGTGGTCAGT
TTGTCACCTTCCAGATCAACTTCTTCTCTTGAAGATCTGTGCACTCCTTCTCCCAGCCCA
CAGGTTGCAAGAAGAGATATGAGTGGAGGAGGAAGTCGATTGGATCTAAGAGCAGATCCT
AGACTCAATGGTCGACCCAAAACGCAACAACCTAGACCTAGCTACAATTCTGCACTGGCT
ACAGCCAAACCTTTAGATCCGATCGAAGGATCTCCCACATCTCTAGAAGGTCGAAACCGA
ACCAGATCGGCTTCCCCCACCAAGAAGCTCTCTTCATTATCCCTTAATGCCCCCTCACTC
CCCCAGTCCCAAGCGCGAGTCAACATTCCTGCACTCATGAGACCAGCAAGTCCCATCAAA
CAACCCAGCCCTCCTAAACCGGCCCCCGGATCCAAGTTCGCGGACGTCTACGGTCGGAGA
CGATAGCATTATACAGTCCATTTTCATAATCATTAATACATACGATACCACAACGCG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E32571g_CDS-001

Protein length: 462 aa.
Product: Nuclear distribution protein, putaive

>YALI0E32571g_CDS-001 MTDIDTPASPLTPNSKAHLEVIAYNQYLQAKEQIQQLEHELTEFQESSKELELELEQELA
ESDKRQAKLEDRISALESEVTEWRKKALDAHKEAASTQQALQREVSSLRDAHKLVKERLR
ETENANDDIEQRERITCSTLEDIQTRYNEALENVAILEAELAAKDVLIGEHHRAKEEIKD
LTEELEHTRKKLAIRDQELEDANKRIMNPPPATNHNATTHRRAVSGTAQVSAEGYLTPLT
STGAKPLSSSRSMQFIHGLQSQMRSLESRVAHVKSSLPKPTTPKRAKSSASAVSGASTIK
SSPSMALLTRKLSEADDVVSLSPSRSTSSLEDLCTPSPSPQVARRDMSGGGSRLDLRADP
RLNGRPKTQQPRPSYNSALATAKPLDPIEGSPTSLEGRNRTRSASPTKKLSSLSLNAPSL
PQSQARVNIPALMRPASPIKQPSPPKPAPGSKFADVYGRRR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG