YALI0E32593g

Overview

Description weakly similar to uniprot|P54787 Saccharomyces cerevisiae YML097c VPS9 vacuolar sorting protein
Locus type CDS
Locus tag YALI0E32593g

Location

Species Yarrowia lipolytica Positions 3868182..3869921
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1740 (nuc.)
Previous locus YALI0E32571g Next locus YALI0E32615g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E32593g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E32593gYALI0E32593g_mRNA-001YALI0E32593g_CDS-001

Nucleotide sequence

 

>YALI0E32593g
ATGAGTCTGTTGGATCTTCCTATCGAGAAGACGAAAAAGAAGGTGGTTGAAGAGGAGCCA
AATCCGCCGTTGGACAACACCAAACCCACCAAAGTCGAGGAGGTGGAACAAGAACAGCAC
GGCGCAAATGTTGAAGATGACGACAGCACCAAGGACACAGCTGACACCACAGATACCAAC
AAGTCGGTCGAGGTTGAGGTAGTTGAAACCGAGCCTGAAAGTGAGGTTGGATCAACCACC
GATGCTGCCCGACCGACTGGGGCTACTCCAGGTAACGAAGAGAAGGCCACTCCAAGCTCG
TCTGATGATAACGCCCCTTTCGACTTTCAGCGGTTTCTGGAACTGCTGCGACACAAGAAC
GCAGACCCCATCGCACGATATCTCAAGTCCTTTCTCAGCGAATTCAACAAGAAGAGATGG
ACTGTCAATGAGCAGGTCAAGATCATTGGTGATTTCAAGGAGTTCATCAGCAACAAGATC
CAACAGATGCAGAGCCCTCCCTTTGCGGATATGACCGACAACGAGCTCGTCAACATGGAG
GAAGGTATCGAGAAGCTTATCATGAACCGGCTTTATTCAAAGACATATTCTCCTGAGGTG
GTCAAGCTGGACAATGCGGACAGCATAGGTGTTCTTCATGCGAAGAATCCCAGTGCCGCT
GCAGACGGAAACGAAGAGGATCTTATCCGAGATCATGTATTGGAAGAGAAACTGCTGCTT
TGGGGATGGATCGAAGGCCGTCATTTGGATATTGACGATAAGTTCTGGAAATCGGGTGCA
TCGTTTGTGACTTTGGCAAGTGAGGAACTTCGAAAGATTAACAACTACAGAGCTCCCCGG
GATAAGATGATTTGCGTGCTCAACTGCTGCAAGGTCATCTTTGGACTTCTGAGACAGACC
AAGAGTGAGGAATCCGCAGACGGGTTCCTTCCTTTGCTTATTTATGTGGTTCTCAAGGCC
CAGCCGCAGCACCTGATTTCTAACCTCAACTATATTCAGCGGTTCAGATCGAGCGAGCGG
CTTAGCGGAGAGCCCGGGTACTATCTTTCTTCGCTGCTGGGAGCCGTTGCTTTTGTTGAG
CAGCTGGACAAGTCGTCGTTGAGCATCACCGATGAGGACTTTGATACCAACCTGGAACAA
ACTCTGGCTGAGATTGCTGAGAAGAACGCCAAGAAGGAGCAGGAGGCCGCCGAGGAGGCC
AAGCAGAAGGCTCTTGCGCCACCAGACACCCCCGGCAGAGCTGATTCACAATCTCCAGCT
CTGTCACCTGAGAGCAGCACTCCTTCTAACATTCTCATGAGCTCTGCAGGACTCATTACT
AGCCCCTTCAAGTCGCTCAGTAAGTTCTTTGAGGGCAGCTTTGACGATGCGGGAGCTTCA
ACGGAGGACGCTACTCCCCAGTCTGAAGCTGAGAGCATCGCTGTTGCCCAGGGTCTGTCT
CACCAGGAGGCAGCTGCTCGACAAGCCTCTGCTGAGGAGTACGAGGCTCAAAGAATCCAA
AATGAGGAACACGCTTCTGTGGTCAACACTCTGCACCAAATGTTCCCTATCCTCGATCAC
GAAATCATTGAAGATATCGTGAGAGAGAAGAAATGCAACGTTGGAGCTGCTGTTGACTAC
TGTCTTATGCTGGTTGGTGAGTCCTGATGTGTACTGCACGACTACCTACAATCAAAAAGG
AACGAAATTAATGAATTATGATGGATATAGATGAATAGAGAAAATAATCTCTAATGATGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E32593g_CDS-001

Protein length: 549 aa.
Product: Conserved hypothetical protein

>YALI0E32593g_CDS-001 MSLLDLPIEKTKKKVVEEEPNPPLDNTKPTKVEEVEQEQHGANVEDDDSTKDTADTTDTN
KSVEVEVVETEPESEVGSTTDAARPTGATPGNEEKATPSSSDDNAPFDFQRFLELLRHKN
ADPIARYLKSFLSEFNKKRWTVNEQVKIIGDFKEFISNKIQQMQSPPFADMTDNELVNME
EGIEKLIMNRLYSKTYSPEVVKLDNADSIGVLHAKNPSAAADGNEEDLIRDHVLEEKLLL
WGWIEGRHLDIDDKFWKSGASFVTLASEELRKINNYRAPRDKMICVLNCCKVIFGLLRQT
KSEESADGFLPLLIYVVLKAQPQHLISNLNYIQRFRSSERLSGEPGYYLSSLLGAVAFVE
QLDKSSLSITDEDFDTNLEQTLAEIAEKNAKKEQEAAEEAKQKALAPPDTPGRADSQSPA
LSPESSTPSNILMSSAGLITSPFKSLSKFFEGSFDDAGASTEDATPQSEAESIAVAQGLS
HQEAAARQASAEEYEAQRIQNEEHASVVNTLHQMFPILDHEIIEDIVREKKCNVGAAVDY
CLMLVGES*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG