YALI0E30899g

Overview

Description similar to uniprot|P26570 Saccharomyces cerevisiae YML016C (ohnolog of YDR436W) PPZ1 ser/thr phosphatase required for normal osmoregulation
Locus type CDS
Locus tag YALI0E30899g

Location

Species Yarrowia lipolytica Positions 3642369..3644037
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1669 (nuc.)
Previous locus YALI0E30877g Next locus YALI0E30921g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E30899g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E30899gYALI0E30899g_mRNA-001YALI0E30899g_CDS-001

Nucleotide sequence

 

>YALI0E30899g
ATGGGAAACAACCCCAGTAAGTCCAAAGGCGGACTGCAGTCTTACCCTTCCTTCTCACGA
TCGGACACACAGGGCTCGACACGGTCCGGTCGGTCCATCCGGTCACGACTAAGCAGCATG
TCCAACAATTCAGAGGCATCTTACAAGACTGCGGGCGGCGAAACCGAACCCCAAAACGTA
CCGGGAGCACCCACGTCCACACAGGATCCCGGTAACGTGAGCACCGAACACATTACTCCA
GTGGATAATGCCACATTGCCGCCATCCATGCAGCAGATTGAGCCCAAAGACCCTATTCTT
GTCCGTGCAGATGGTTCTAGTGGCTCCGCTCACGACACTAACGACGCCCATTCACAACCC
GTGACCCCAGCAGCCGTTCCGTCGGCAGGATCTTCACCAAAAGACGGAACTCCTGGCCCA
CTATCGGCAGACGTGCCCGGCGGCTCGGGATCTGACTACTTTGCCCGACGACAGCTCTTC
TCGCCCCCGCCAGGCACCCCGGCCACCCCCGGAAACGACTCATTTAACAACTCGGGCGCG
TCCACCCCTAACATCATTAGCGAAAACAACATGACGCTCAACATAGATGAGGTGATCCAG
CGACTGCTGGATGCTGGCTACTCGGGAAAAATCACAAAGGCAGTGTGTCTCAAAAACTCG
GAGATTGCCCTTATCTGCAGACGGGCCCGGTCCATTCTGCTGTCACAACCAACGTTGCTC
GAGCTGCTGCCACCAGTCAAGATTGTCGGAGATGTGCACGGCCAGTTTGGCGACCTCATT
CGAATGTTCGACATGTGCGGGTTTCCACCAGCAGCAAACTATCTGTTTCTGGGAGATTAT
GTGGACCGAGGCAAGCAGTCTCTGGAGACCATCCTGCTATTGTTGTGCTACAAAATCAAA
TACCCCGAGAACTTTTTTATTCTGCGAGGAAACCATGAGTGCGCGAAGGTCACCCGAGTC
TACGGCTTCTACGACGAGTGCAAGCGCCGATGCAACATCAAAACATGGAAGACGTTTGTC
GATACATTCAACACCCTGCCCATTGCCGCAGTGGTGGCCCAGAAGATCTTCTGTGTCCAT
GGCGGCCTCTCTCCGTCTCTCAGTAGCATGTCGGAAATCAGATCCATTGTACGTCCCACG
GACGTGCCCGACTACGGTCTGATCAACGATCTGCTGTGGTCCGATCCAGCAGACACACAG
AATGAATGGGAAGACAACGAGCGAGGTGTCTCCTACTGTTTCTCCAAGGTGGCCATCAAC
AAGTTCCTGACGAAGTTCTCGTTCGATCTGGTCTGCCGAGCACACATGGTGGTTGAAGAC
GGTTACGAGTTCTTCAACGACCGTTCACTTGTAACAGTCTTTTCAGCCCCCAACTACTGT
GGAGAATTCGACAATTGGGGCGCCGTCATGAGCGTGTCCGAGGAGCTGCTATGTTCTTTC
GAGCTGCTCAAGCCGTTGGATTCGGCCGCATTGAAGCAGGAAATGAAAAAGGGAAAGCAT
CAGCGAAGACTGAGTCTAGAAACACGAAGCGCCCCTGCTACGCCTCAGAGCGTCTAGACG
CTGACAAACTTACTCGCATCTACATTTGCCTGAACCAATGCTCAAGGTTGCTGGCATATA
TACTGAGCTATATACTGAACAAATTGTATTTATGACGTTTCTCTAGGCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E30899g_CDS-001

Protein length: 519 aa.
Product: Serine/threonine protein phosphatase Z, isoform of Ppz2p, putative

>YALI0E30899g_CDS-001 MGNNPSKSKGGLQSYPSFSRSDTQGSTRSGRSIRSRLSSMSNNSEASYKTAGGETEPQNV
PGAPTSTQDPGNVSTEHITPVDNATLPPSMQQIEPKDPILVRADGSSGSAHDTNDAHSQP
VTPAAVPSAGSSPKDGTPGPLSADVPGGSGSDYFARRQLFSPPPGTPATPGNDSFNNSGA
STPNIISENNMTLNIDEVIQRLLDAGYSGKITKAVCLKNSEIALICRRARSILLSQPTLL
ELLPPVKIVGDVHGQFGDLIRMFDMCGFPPAANYLFLGDYVDRGKQSLETILLLLCYKIK
YPENFFILRGNHECAKVTRVYGFYDECKRRCNIKTWKTFVDTFNTLPIAAVVAQKIFCVH
GGLSPSLSSMSEIRSIVRPTDVPDYGLINDLLWSDPADTQNEWEDNERGVSYCFSKVAIN
KFLTKFSFDLVCRAHMVVEDGYEFFNDRSLVTVFSAPNYCGEFDNWGAVMSVSEELLCSF
ELLKPLDSAALKQEMKKGKHQRRLSLETRSAPATPQSV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG