YALI0E30877g

Overview

Description weakly similar to uniprot|P34167 Saccharomyces cerevisiae YPR163c TIF3 translation initiation factor eIF4B
Locus type CDS
Locus tag YALI0E30877g

Location

Species Yarrowia lipolytica Positions 3639292..3640694
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1403 (nuc.)
Previous locus YALI0E30855g Next locus YALI0E30899g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E30877g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E30877gYALI0E30877g_mRNA-001YALI0E30877g_CDS-001

Nucleotide sequence

 

>YALI0E30877g
ATGCCTCCCAAAAAGCAGCAGCAGAAGATGTCGCTCTTCGAGTTCAATGCGAACGAAGAC
TGGGCCGACGACATGGATGAGACGCCTCTTGACAGTGGTTACGACAACCAGAGCTACGGT
GGATACTCCTCCAACAACAACTCTAGCTCTTACGGTGCTTCTCAGTCTTCTTACGACCGA
CCCAAGCGAGACTACCCCGAGACCCCCGTTCCCGATGTTGCTCCTTGGCTCGCCAAGCTG
GTCAACCTCCCTTACGACATTACCGAGGACTCTGTCAAGCAGTTCTTTGGTCCTGGTTAC
GACATCAAGGAGATCACCCTGGTAATGGACCGAGACACCGGAAAGCCCCGAGGAATTGTC
AACATGGAGTTTGGCGATAAGGCTTCTCTGGAGCGGGCTCTGGGCCTTTCTGGCCAGAGT
TTTGGTGGACGACCTGCTCGTGTCTTTGTCAGTACTCCTCGAGACACCCGAACTGAGCGA
GACTGGACCCGACGAGGACCTCTTCCTCCTCTTGAAGGTGAGGCTCGAGCTGACACCCGG
GACTGGTCTCGACGACCTGCTCCTCCCGTGTCTGACTTCGACGGACCCCGAGAGACCCGA
GAGGCTCGAGAGGCCCGAGAGGACGCTGAGAACCACCGAGATTTCTCTAACTGGACTCGA
CGAGGTCCTCTGCCCTCCAATGACAATGAGCAGCGAAAGAGCCGAGGAATGGAGTTCCGA
GAGCGACGATCTCGACAGGAGGACCCCGAGAACCATCGCGATTTCTCCAACTGGGAGCGA
CGAGGACCCCCCAAGGGCGAGGCTGTTCTGCCCGAGCAGCGGGAGCGAGCACCACGACCC
CCTCGAAAGGAGCGATCTCCTACTCGAGCCGACCAGGTCGACTCTTGGAGAGGTGATGCC
AAGCCCTCTGGACCCGGTAAGACCGTGAACCTGTCTGGAAGCTCTCTGTTTGGCTCTGCC
AAGCCTATCGACACCACTGAGCGACTGGCTGCCATTGAGGCCCGAAAGGAGAAGGAGCGA
CAGGAGCTGCTCGCCCGAAAGAAGGAGGATAAGCCCAAGGTGGTCAAGGAGGACAAGACC
GAGCGAACCTGGGAGCGACGAGGACCCCTGCCCCCTAAGGGCCGAGACTCCAAGCCCGCT
GGAGCTGCCAAGAAGGACGACGCCAAGCCCAAGCCCAAGGCCACTTTTGCTGCCCTTGCC
GTTGAAGGAGAGGACGAGGACGAGTCTGCTTCGGCCCCTGCGGAGACGAAGCCAGCTGAG
GAGGCCAAGGAAAATGCTGATCTGCCCGCTGCTGTTGAGAAGCTGGAGATTGAGGATGAT
GGAGACTGGAATGTTGTTTCTGGCAAGAAGCGGCGATAAAAGGATTTGTATGTAAATGAA
CTGATGTATAAGTATTGAGTGGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E30877g_CDS-001

Protein length: 453 aa.
Product: Conserved hypothetical protein

>YALI0E30877g_CDS-001 MPPKKQQQKMSLFEFNANEDWADDMDETPLDSGYDNQSYGGYSSNNNSSSYGASQSSYDR
PKRDYPETPVPDVAPWLAKLVNLPYDITEDSVKQFFGPGYDIKEITLVMDRDTGKPRGIV
NMEFGDKASLERALGLSGQSFGGRPARVFVSTPRDTRTERDWTRRGPLPPLEGEARADTR
DWSRRPAPPVSDFDGPRETREAREAREDAENHRDFSNWTRRGPLPSNDNEQRKSRGMEFR
ERRSRQEDPENHRDFSNWERRGPPKGEAVLPEQRERAPRPPRKERSPTRADQVDSWRGDA
KPSGPGKTVNLSGSSLFGSAKPIDTTERLAAIEARKEKERQELLARKKEDKPKVVKEDKT
ERTWERRGPLPPKGRDSKPAGAAKKDDAKPKPKATFAALAVEGEDEDESASAPAETKPAE
EAKENADLPAAVEKLEIEDDGDWNVVSGKKRR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG