YALI0E30921g

Overview

Description weakly similar to uniprot|Q7SFY9 Neurospora crassa NCU03105.1 predicted protein (39797 - 38088)
Locus type CDS
Locus tag YALI0E30921g

Location

Species Yarrowia lipolytica Positions 3643809..3645353
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1545 (nuc.)
Previous locus YALI0E30899g Next locus YALI0E30943g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E30921g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E30921gYALI0E30921g_mRNA-001YALI0E30921g_CDS-001

Nucleotide sequence

 

>YALI0E30921g
ATGGACTCTCTCAGCGCGTCCCAGAGCGCGGCCCTGAAACCCAAACCCGTTTCTTCGGTC
TTCAACCGTCGACCAGGCTCGGGAGTGCATCAGGCTGTGCCTCAACGGATGCGGACCACA
CCAATCAAACAACAGACGGCTCCCCAGCCACGAGTGAGAGCCCACAGACCACAAAAAGTA
ACACTGTCAGCGGTTCCATGCTCTATTTGTGACCAGAGGGTGCCCGAACATCACATGATG
TGCTGCGGATGCGCTAATTACTCCATTCTGGCCCATCGGGTGGCGCAAATCAAGATCGAC
GCTTCACTGGACACAGTCACACAGAAGATAGAGAACATCGACAAGCTAGACTGTCCGGAT
AAGGACCCTGGTACAGATCCGTTTCGGCTGCGACTGCTCAAAATCAAACAGCAGGGTGTC
CGGAGAGAGCTAGATGTAGTCCGAAAAGCCAGAGACTTACAGACAGATGAGATTGCAGCC
AAGAAGCGACACCTAGCAACACTGAGGAACCAGGTTTCAACTATGAGAGAAACAGCCGCC
TCACTACACACACAGAGTGTCAATGAGCATCAGAAAATCAAACGGAAACTGTCACAGGAT
GTCCAAGAGCTAAAGACCAAGGTCAACACGGAGATCCCACACAGTCTTCTCGCCAAACGA
AGCGTACTCTGTCGAGAGCTGGTCTCTCTGTACAACATTCGATTGAGAAAGGTGAGACGA
GGGAGTGGTATCACTTCTGTTGGGTCTACAGCAGATACATTTCCACTAATTGGAACGCTC
TCTCTTCCTGATATCATCACGTTGTGCTTATCGTCTCATCGAGAGATCAACACTGCGTTA
GATAGACTTGCATCTTTCACATGTCTCGCAGCATACTATTTGGGGGCTCCTCTTCCTTAT
GTCATTCTACTCCCCCAGAGACGACATCCTTACATCCGCATTTCCAGCAACAACTACCCG
TTGCATTTGGAAGACCCACTGCCCCAGGTATCATCTGAGAAGCCTGCCGTGTTCAGCAAG
TTTGCACACGCTCTAGCTATGCTCTGTCTGAACTTGGCCTCGATTTCCCACAAACTAGGG
TTCCATTCTCATCTCAACACCCCCGAAGAAATTGTCAAGATCGACAAGATCATTTCTCGC
ATGTTCCTGACCATTGAAGAAGAGGATCCTGATGGTAACGAAGTCACAGACGTGGAATTA
TCCTGCGTAGCAGACTATATCATTACCCAAGTCTACCTTGAGGTGGATGGAGGAGGTAGT
GAGTGGGTCAGTCTATAGAATATTTATACATAATTATATCATTGTCATCATCACCTTGCC
TAGAGAAACGTCATAAATACAATTTGTTCAGTATATAGCTCAGTATATATGCCAGCAACC
TTGAGCATTGGTTCAGGCAAATGTAGATGCGAGTAAGTTTGTCAGCGTCTAGACGCTCTG
AGGCGTAGCAGGGGCGCTTCGTGTTTCTAGACTCAGTCTTCGCTGATGCTTTCCCTTTTT
CATTTCCTGCTTCAATGCGGCCGAATCCAACGGCTTGAGCAGCTC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E30921g_CDS-001

Protein length: 426 aa.
Product: Conserved hypothetical protein

>YALI0E30921g_CDS-001 MDSLSASQSAALKPKPVSSVFNRRPGSGVHQAVPQRMRTTPIKQQTAPQPRVRAHRPQKV
TLSAVPCSICDQRVPEHHMMCCGCANYSILAHRVAQIKIDASLDTVTQKIENIDKLDCPD
KDPGTDPFRLRLLKIKQQGVRRELDVVRKARDLQTDEIAAKKRHLATLRNQVSTMRETAA
SLHTQSVNEHQKIKRKLSQDVQELKTKVNTEIPHSLLAKRSVLCRELVSLYNIRLRKVRR
GSGITSVGSTADTFPLIGTLSLPDIITLCLSSHREINTALDRLASFTCLAAYYLGAPLPY
VILLPQRRHPYIRISSNNYPLHLEDPLPQVSSEKPAVFSKFAHALAMLCLNLASISHKLG
FHSHLNTPEEIVKIDKIISRMFLTIEEEDPDGNEVTDVELSCVADYIITQVYLEVDGGGS
EWVSL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG