YALI0E16863g

Overview

Description some similarities with uniprot|P38741 Saccharomyces cerevisiae YHL024w RIM4 No sporulation
Locus type CDS
Locus tag YALI0E16863g

Location

Species Yarrowia lipolytica Positions 2000509..2002656
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2148 (nuc.)
Previous locus YALI0E16841g Next locus YALI0E16907g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E16863g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E16863gYALI0E16863g_mRNA-001YALI0E16863g_CDS-001

Nucleotide sequence

 

>YALI0E16863g
ATGACTAATCTGGGATCTGGATGGCCCAAGACAATCCCTTTTGGTCACAGAACCGGGTTG
CCGTTTGTTCCCGTCAAATTCCGAGTGTGGTGGTGTCGTTGTTGTGACTGACACCACGCA
TCATCTCAATGTATTAAGCATGGCACTTTCTGTGTCACCTTGTGTATGTCACTACATAAC
CCTATTATGTCTGTGTTAATATTTTCATGGCTATATAAGAGCCCCTCCTCTTGCGCCGCG
TTCTTCCTTCCTCTTCCCAATCACATCACATCTTCTTCCCCCACTCAGACCAGCAGCTCG
CTTTCCACCACCCAGCCACCCCCACAGCTAGCTCCTGACCATGCCCAAGACCAGCCCTAC
TACCACTCCTCCCCCTGCGGATACCCCCTGTGATACAGCCTCTGTTACCAAGGGCTTTGC
TTCCCTGATTGTCTCCAGCGAGGGTGAGATCGTTTTTTGCTTTACCTGTCACAACACCCG
CGTTGTCACAACCTCCTAACACAGCCGACCTCAAAGACAAGACGCTCGATGTCCTTAGCG
ACCACGACGACACCGCTGACAACAGCATCCTAGACGACCCCGAGCCCAACTCGTTCACCT
CGGACTCTCTCACTGCTGCCGAGCCCGAGACCAGAGAAGATGACAAGGGAACCCCGTACT
ACCCCAACCAGGAACGACCGTCGCGGCCGTCGTCGTGTGTGTTTGTGGCCAGCTTGAACG
CCACCCTCACCGACGACCAGCTCAACAATTCGGTCACCCGCCACTTTGCCCAGTGGGGCT
CCATTGCCTTCGTCAAGGTCCTCCGAGACCTGTGCGAGCGGCCCTACGCCTTTGTCCAGT
TCAACACCGACGACGACGCCAAGAACGCCATTGCCAAGGGTCAGGGAACCTACCTCGACA
ACCGCTACATTCGTTGCGAGCCTGCTCGAGTCAACCGAACCCTCTTTGTTTACCAAAACC
CATCCACCACGTCTCCCGTAAGTATCCCCCCCCTCCGATGATGTCACGACGACTGAAACA
TCCTTACTAACCTAGCAACTCAAAAGCTATCTCGAGGAGTTTGGAGAGGTCGAAGATCTC
GTCAATACCTGTGTTCGATCCAGATCGTCCGAAACCAACCGAGGTTGGTTTGCTCGCTTT
GCTTACCGATCCGATGCCATCAAGGCTTACCTCCATATCCGAACCCAGGGTGATTTCGAG
GTTGAGTGGGCCCAAAACCTCAACAATGACTTCAGCAAGACCACTGTCACCACGGTCGAC
CCCAAGTCCATCTTCATTGGCCAGCTGAACCCCGCCACCACCCCCGAAGACCTGCGGGCT
GTGTTTGGCCGGCATGGCACCATTGTCTCCTGCCAGATCCAGTTCAAGGAGCGGGACAGG
ACCTCTTCCATCAAGACGCTTGCTCGGCGGCCGTCTGCATTTGCCTTTGTCTCCTACGAA
GAACCCTCCTCCGCCGACGCTGCCGTTGAGAAGGAGAACCACAGCATTCTCCGGAACCAC
ACAATCCATGTCCAGTATAAGGAGGTCCAGCACCAGAAGACCAACCCCAACCACCTGCCC
ACGTTGGAGTTTGCCCCCCCTCCCGTGAACATCCCGGCCCTGGGCCGGCAACAGCACCAG
CCGCGGCGGCACCACTCTCTGCCTTTGTACAATGCTGGCAACCCTCCCTCTGGTCCCCGA
CAGCGTGGTTTTTCCATGTATGGCCAGCCGCCCAAAGGTCAGGATGTTGACAGCCATCCG
TCGGACAAGCCCCAGGAGGCTGACGGGGACCCCAAGCCCAAGGTCAACATTGGCACACCC
TTCTACCCCAGACAGCCGCGGGCTGTGTCCTACGGAGGAGGTGGGGGGCTGCAGAACAGC
CGGTGGGCTCCTCAGGGCCAATACCGGATGGACAAGGACAACCACTACCACCACAACCCT
CACCACCACTACGGAGGCAACGGGTATCGAGGAGGCGGTGGTGGATACGGCGGTCGACGT
CACTACCGGCCCAAGGCTTACGGGCCTACTCCGGTGCCCTACTACGTGGACTACCAGGAC
TGGTATGCTCCCAATGGCCCTCACATGGCGGCGGGCGCAGGATATTACGTGGACCCGCCC
ATGTCTCAGAAGCCCCATGTCCGAGGGGACGGTGGACACCACAACTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E16863g_CDS-001

Protein length: 563 aa.
Product: Conserved hypothetical protein

>YALI0E16863g_CDS-001 MTNLGSGWPKTIPFGHRTGLPFVPVKFRVWWCRCSDLKDKTLDVLSDHDDTADNSILDDP
EPNSFTSDSLTAAEPETREDDKGTPYYPNQERPSRPSSCVFVASLNATLTDDQLNNSVTR
HFAQWGSIAFVKVLRDLCERPYAFVQFNTDDDAKNAIAKGQGTYLDNRYIRCEPARVNRT
LFVYQNPSTTSPQLKSYLEEFGEVEDLVNTCVRSRSSETNRGWFARFAYRSDAIKAYLHI
RTQGDFEVEWAQNLNNDFSKTTVTTVDPKSIFIGQLNPATTPEDLRAVFGRHGTIVSCQI
QFKERDRTSSIKTLARRPSAFAFVSYEEPSSADAAVEKENHSILRNHTIHVQYKEVQHQK
TNPNHLPTLEFAPPPVNIPALGRQQHQPRRHHSLPLYNAGNPPSGPRQRGFSMYGQPPKG
QDVDSHPSDKPQEADGDPKPKVNIGTPFYPRQPRAVSYGGGGGLQNSRWAPQGQYRMDKD
NHYHHNPHHHYGGNGYRGGGGGYGGRRHYRPKAYGPTPVPYYVDYQDWYAPNGPHMAAGA
GYYVDPPMSQKPHVRGDGGHHN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG