YALI0E16907g

Overview

Description weakly similar to uniprot|P20485 Saccharomyces cerevisiae YLR133W (ohnolog of YDR147W) CKI1 choline kinase
Locus type CDS
Locus tag YALI0E16907g

Location

Species Yarrowia lipolytica Positions 2003914..2005702
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1789 (nuc.)
Previous locus YALI0E16863g Next locus YALI0E16929g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E16907g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E16907gYALI0E16907g_mRNA-001YALI0E16907g_CDS-001

Nucleotide sequence

 

>YALI0E16907g
ATGGCCCCTCAACCCGACCAAAGCTCCATGTTTGTCACCTCTCCACAGACCCAGCCGGAC
GACAGTCCGCTGATGACGCCGCTGGCGGTCCCCCAGCACGCGGGACTCAGCCAGGCGATT
TCCAAGCTCAGTCTCAACACCAAGGCCCCCGGCACCGTCGAGAAGCCCGTGCGACCTCCG
CTGGCGACGCGGGTGTCGGGTCCACACATTAAGCTGCGACGGTTTTCGGGCACCAAGAGC
GAGCACTCGTCTGCCGGCGAGGAGGATCTACCCCCGCCAAACGTGAATTTTTTCCTCGAT
AACCGACTCCCCACGGAGTACTTCAAGCAGGATATCCTCATGTTGATCCATACCCTCAAG
ATTCCCAAGTGGAAGTACGTGGAGAGCACCATGGCCGCCGACATGGTGGTCACCCGACTG
TCTGGTGCGCTCACCAACGCCGTCTACCACGTTGCTCCCCCGACATACCTCAAGGAGCGG
CTGCGAGAAGCCAACGAAGGCTTTGTGGCCAAACACAGGCTGCCGCTGCCTCTGCTGCTA
CGAGTGTACGGCCCCCAGGTTGAGCATCTCATCGACCGGGACTCGGAGCTGCGAATTCTG
CAGCGTCTGGGACGAAAGAACATTGGACCCAAGATGATGGGCACCTTTACCAACGGCCGG
TTCGAGCAGTTCTTCCACGCAAAGACCCTGTCCAAGGAAGATCTCAGAGACCCAGACACT
TCTGTGCAGATTGCCAAGCGAATGCGAGAGCTGCACGACCACGTGCGACTGCTTCCTGAA
GAGCGAATGTCTGGCCCCGGAGTGTGGGTCAACTTTGAAAAGTGGGGCGTGCGAGCCAAG
GAGGTGCTTGAGATTCTCGATAACCGGGCCAAGACCAACCCTGCCGCCGAATGGACTTGC
CAGACCGTTGTGCAGAGCTCCTGGGACGAATTCCTGACCATGGTTGCCAAGTACCGAAGC
TGGCTGGAGCACAAGCATGGAGGCGCCGAGTCCATCAACAAGAAGCTCGTCTTTGCCCAC
AACGATACACAGTACGGCAATCTGCTGCGTCTGGAGCCCCCGCCAGGCTCTCCTCTGCTG
CAACCTCAGCTGGAGCACAGACAGCTCATTGTCATTGACTTTGAGTACGCATCCCCCAAC
GCCCGAGGCTTTGATATCTGTAACCACTTTTGCGAGTGGATGTCCGACTACCACGATGCT
CAGCATCCCGAAACCATTCATGAGAAGGCCTATCCTACCGTCAAGGAGCAGCTCAACCTT
CTCAACGGCTACGTGGAGCATGGTCTGGAGTCCTTTGATGACGAGGACCAGATCCAGGTC
GAGGTGGACGGACTCATGGAAGAGGTGCGTGACTGGCGACCCGCCGTGCACCTCTACTGG
CTCGTGTGGGGTATTGTGCAGGCTGTGATTGACCAGGAGGAAGACGATGAGATCCGAGAG
GAGCTGAACATGGAAACTGGCCAGTACACGTTTGAGACCGAGGAGGAGAAGCAGCAATTG
TCCGCGTCTTCCGGCTCTTCTGCCAATCTCAAACCGTCCGTGAGTCACTCATCTGCTTCG
GAAGTGGAAGAGGAGGAAGACCCCTTTGACTACCTCAGCTACGCGTCCCAGAAGGCCCAA
CTCTTCTGGAGCGACATGATCAGATTCGGGCTCTTGGACGAGAAAGACTACAAGGGAGTC
ACCCGGTTTATTAATGCGTAGATACTGGACGCAACCAAACACGGGGTGTCACAAAATGAA
AAATAACGCTAATGTAGATAATCAATGTATATTAAGGATGGCTTCTCTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E16907g_CDS-001

Protein length: 567 aa.
Product: Conserved hypothetical protein

>YALI0E16907g_CDS-001 MAPQPDQSSMFVTSPQTQPDDSPLMTPLAVPQHAGLSQAISKLSLNTKAPGTVEKPVRPP
LATRVSGPHIKLRRFSGTKSEHSSAGEEDLPPPNVNFFLDNRLPTEYFKQDILMLIHTLK
IPKWKYVESTMAADMVVTRLSGALTNAVYHVAPPTYLKERLREANEGFVAKHRLPLPLLL
RVYGPQVEHLIDRDSELRILQRLGRKNIGPKMMGTFTNGRFEQFFHAKTLSKEDLRDPDT
SVQIAKRMRELHDHVRLLPEERMSGPGVWVNFEKWGVRAKEVLEILDNRAKTNPAAEWTC
QTVVQSSWDEFLTMVAKYRSWLEHKHGGAESINKKLVFAHNDTQYGNLLRLEPPPGSPLL
QPQLEHRQLIVIDFEYASPNARGFDICNHFCEWMSDYHDAQHPETIHEKAYPTVKEQLNL
LNGYVEHGLESFDDEDQIQVEVDGLMEEVRDWRPAVHLYWLVWGIVQAVIDQEEDDEIRE
ELNMETGQYTFETEEEKQQLSASSGSSANLKPSVSHSSASEVEEEEDPFDYLSYASQKAQ
LFWSDMIRFGLLDEKDYKGVTRFINA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG