YALI0E16841g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0E16841g

Location

Species Yarrowia lipolytica Positions 1996627..1999884
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 3258 (nuc.)
Previous locus YALI0E16819g Next locus YALI0E16863g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E16841g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E16841gYALI0E16841g_mRNA-001YALI0E16841g_CDS-001

Nucleotide sequence

 

>YALI0E16841g
TCAATCTCGGTATAGGCTGACATTGGAGGAAGGTATAACATTCGGTCTCAGGTGTATACT
CAGCCCGAGTGCCGTTGATATCCGTCCCTGTCGTCCGATATTATTTCGTCCTGACATATT
ATCACCGTTGCAGGCGTCTTTCAAGTACACCTCACATTGCTAGGAGATCCACCGATACTA
GCATCTCAGCATCTCAGCATCTCAGCATCTCAGCATCTCAGCATACATCCATCTGCACCA
TCAAAAGATAAGAGCCGCCACAGCCAAAAGACAAGCGAATCAAGTCAACATCTTCATCAA
TTGGTACCTTTCCGACACTGTCCGTCCGTCTCCGTTTCCCCTCCTTTTTGCACCGCCCAC
CAAACTCCACAAAGTGGTCTCCCCTGGCCAAACTGCCGTCTCCACTAGACTATTTTAACC
GACACCAAGAGTGTCCGCGTTCCTGGATTTGGCAGACCATCACGCTATCCAGATAATTTC
CGTCGATAGCGCTCCACGTCTGTTGGCTTGGTATTTTTCTTTTCTTTTCTTTTCTTTTCT
TTTCTTTTCTTTTCGTCCGTCTATTTTTACTCTGGAGCCCACCATCTGGAGCCCACCCAC
TCCACCTCCAAGGACTGTATGCTCCAATAACAGCATCTGCAATTGAGTGCACACAGTACA
AGAGTCGCACACACATACAAGCACAGAATATCTGCGCATACGTTTTGCTCGCCTTTTCTT
TTCGACACTTCTTCTGCAAACAACCGCTTCCGTCATCTAGGGGCTGATCTCTTTTAGTTA
CCCCTTTCTAGACCACGCGGCCACTCTGAGTTTGGCCTCACTCCCTGTTCTACGTCTCCT
TTGCAATAGCGCGTTTGACGTGAGTCTATCCAGCAATTAGACCCGTTTCCGGTAAGTACC
CTAACCCCCGACCCAGACCCACGCGTTGCAACAATAGAATAAGCTTTTCAATTAGCAATC
CCAGACAGGAAAAGTAAACAGTTGGGAGACTTGAGAGTTGAGGGGGGACGGTTGATGGTG
GCGCAAGAGTCGATTGGCGGCCCGATTCTCGACGCGAAACAGCTTTGAGAGGCTTAGTAA
GCTGTTGGAAACCGGCCTCCAGCTCGTCTTTGGTCTCCCCTACCGCCTCTCTAGCAGTCT
CGCTCCTGCCTCCCCCTCTGTTCCCCTACCCAGCCCTACTCTGTTCCATCTCAGTTAAGC
TTTGGTTCCTTGTGCACACGCGTGAACCGTGTGTTGAAACCTTAATCTAACGTTTAGATA
TTATTAGGATGGATCTTTCCCAGTTCGAATCCTTCAAGTCTCAGACGACATTTCGGCTTC
ACAAGTTGGACCCCTTTTTCCCCGACCATTCCACCCACCGCCATCTTCTTCCGCCCAGTC
CCTCTTTATCTTCCTCCAGCACCTCCGTTTCCACGCCTGCCTCCAACTGTGGTCCCGACG
TTTACAGCATTTTAGGGTGAGTACGCTGACAAAATTGAGTCTCGAAAACGGGGCTCAAAA
ATGGAGCTCAAAAATGGGGCTCAAAAATGGAGCTCAAAAAATGGGGCTTAAAAAAAGAAG
AAAAAAAATCTCCCTCGCATCGGTTGCCGTCATTATCTGCTCAATTTGGGAAGGACACAA
ACAGCAGCGTCACATGGCGTGTGTACACCGCCGCCTGCCTGCCTGCCTTTGGACGACAAA
GTGGTTAATTACTGCTCCTGCGTTGCATCTCCTATGTGCATGGTGTCCACACTGTGCGAT
AGAAAAATTATCGTACATTGTTTGAAGAGGTCTTAAACGGTAAAAATAGGAGGTTTTTTC
ACACCCCGTCTATTAGGTGCCCCGTCCTCTTCTCTTCTACAAAGACGAGAAAGAAAAGGG
AAAAAAGGAAGCAGAAAAACTAACACAGAATCTGCCCCGACTCGTCTCACTCGCTCCTTC
ATCCTCATCATAAGCTCTCTCCACCCTTGTCCCAAACCACCACACAAACACAAATGAGTC
TTGCTGCTCCTAAACCTCTTGCTCTGCCAGCCTTCTACGACTCGGGATCCAAAATGCCTC
TCGGCCACGACGTGCCCAAAAAGCGACGGGGTCGTCCTCGAAAGCGGCGTCTCGACGCCG
GCGACTCCTTCAGCAGCGCCACCTCCTCGGACCCTTCCTCCTCCCCCCTCCTGTCCACCG
ATGGAGCCGCTGCAGCCAGAACCATGGCCTCTCCCACCACCACCCCGACCAAGAAACGCA
AACTGACGGCGCCTCCGCCACAGCTGTCGTCGTCGCCACCCATGGCTGCGCTCCGATCGT
TCGACACCCCCAGCAGCCCGCCACCACGACCACACACTCCACCAGGGTACGAGACGGTGC
TACACACCCCCAAGCAGCTGTCCAAACATCACCACAACGCCAGTAATCACACAGGCCAAC
CGACCACCGCCACTAACGAAACCCCCCGAAGCCGAACGCTGGCCCGATTCGAGACGTCGT
CCCACGTGAACCCGTCGCTCATCTACGCCTCGGCCACCCAACCCATGCCTTCGGCGTCCT
TCTCGGACCTCCCGTCGTCCCCCACCTTTGCATCTTCCTCTTCCATCATGTCGCCACAGA
CGCCCCGCAACGGCTTCTCCTTCTCCACCATCATGGCCTCGTCGCCGCTGTACCACGGCT
ACTTTACGTCGCCGGCCCAGAACGACTCTCCTGGAGGCTCGGGCCTGGTCAAGCTGTCCG
TCAAACCCATGCCCATGCCCTCGTTCAAGAAGGACGCCGAGCAGCTGTCAGATCCGTTCA
AGAACTACCAGGTGCGCTCGGGACCCCTCGGCGGCCCCCTGCAGCCCCTGGAGCAGTCGC
CCGTGCAGATCAAGCGGCTGGAGATCAAGCGACGCATCTCGCTCAACATTTCCGCCACTG
GAAAGGCCTCGGTGGGGATCGCAGACGAGCGCCCTCCTCACATGACTCGGTCATACTACA
CGGATCCGGACCGCGAGAACATCGACAAGCTTTTCCCCGAGCTGTCGCCTCGACAGGTTG
TTCCCGAAGACGACGACGACTCGAGCGACGATGACGACGACGACACACGCATCGGACCTG
GTTCCAGCCGCCGATCTGAGAGCCAGGATCCTCTCAGCGATGCCAAGGCCGCTCTTCAGT
CCATGATGAAGAGCGGGCGGACCAGCACTTCTCAGGCTGCCTCTCGAGCAGGCAGTCCCC
CTCAGTGGAGCATTTTGCATTAGTCATATACAAGTACTACAAGTCAAGTAGATAATTTAT
TGGAGTTTTAAGATGTCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E16841g_CDS-001

Protein length: 410 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E16841g_CDS-001 MSLAAPKPLALPAFYDSGSKMPLGHDVPKKRRGRPRKRRLDAGDSFSSATSSDPSSSPLL
STDGAAAARTMASPTTTPTKKRKLTAPPPQLSSSPPMAALRSFDTPSSPPPRPHTPPGYE
TVLHTPKQLSKHHHNASNHTGQPTTATNETPRSRTLARFETSSHVNPSLIYASATQPMPS
ASFSDLPSSPTFASSSSIMSPQTPRNGFSFSTIMASSPLYHGYFTSPAQNDSPGGSGLVK
LSVKPMPMPSFKKDAEQLSDPFKNYQVRSGPLGGPLQPLEQSPVQIKRLEIKRRISLNIS
ATGKASVGIADERPPHMTRSYYTDPDRENIDKLFPELSPRQVVPEDDDDSSDDDDDDTRI
GPGSSRRSESQDPLSDAKAALQSMMKSGRTSTSQAASRAGSPPQWSILH*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG