YALI0E16599g - PEX16

Overview

Description uniprot|P78980 Yarrowia lipolytica YALI0E16599g PEX16 Peroxisomal membrane protein
Locus type CDS
Gene name PEX16
Locus tag YALI0E16599g

Location

Species Yarrowia lipolytica Positions 1967343..1968727
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1385 (nuc.)
Previous locus YALI0E16577g Next locus YALI0E16621g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E16599g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E16599gYALI0E16599g_mRNA-001YALI0E16599g_CDS-001

Nucleotide sequence

 

>YALI0E16599g
ATGACGGACAAGCTGGTCAAGGTGATGCAGAAGAAGAAATCGGCGCCGCAGACGTGGCTC
GACAGCTATGACAAGTTTCTCGTGCGCAACGCCGCGTCGATCGGTTCAATCGAGTCCACT
CTTCGAACGGTTTCGTACGTTTTGCCTGGTCGATTCAACGATGTCGAAATCGCCACCGAA
ACGCTCTACGCGGTGCTCAACGTGCTGGGCCTCTACCACGACACCATTATTGCCCGTGCA
GTGGCCGCATCGCCCAACGCTGCCGCCGTGTACCGCCCGTCGCCCCACAACAGATACACA
GACTGGTTCATCAAGAACCGAAAGGGATACAAGTACGCCAGCAGAGCGGTGACCTTTGTT
AAATTTGGCGAGCTTGTGGCGGAAATGGTGGCCAAGAAAAACGGCGGCGAAATGGCCCGG
TGGAAGTGCATTATCGGTATTGAAGGAATCAAGGCGGGGCTCAGAATCTATATGTTGGGC
TCTACACTGTACCAACCGCTGTGCACAACCCCCTACCCCGATAGAGAAGTCACGGGAGAG
CTGTTGGAGACCATCTGTAGAGACGAGGGAGAGTTGGACATTGAAAAGGGACTCATGGAC
CCCCAGTGGAAGATGCCCAGAACCGGACGAACCATTCCGGAAATCGCACCCACAAATGTC
GAGGGCTATCTTCTCACCAAGGTGCTGAGATCGGAAGATGTTGATCGGCCGTACAACCTG
CTGTCTCGCCTGGACAACTGGGGAGTGGTGGCCGAGTTGCTGTCCATTCTGCGACCCCTC
ATCTACGCATGCTTGCTTTTCCGACAGCACGTCAACAAGACCGTGCCTGCGTCCACAAAG
TCCAAGTTCCCCTTCCTCAACTCCCCTTGGGCCCCCTGGATCATCGGTCTTGTGATTGAA
GCATTGTCGCGAAAGATGATGGGATCCTGGTTGCTGCGACAGCGACAGAGCGGCAAGACC
CCCACAGCTCTCGACCAGATGGAAGTCAAGGGCCGAACGAACCTGCTGGGATGGTGGTTG
TTCCGAGGCGAGTTCTACCAGGCCTACACCCGTCCTCTGCTGTATTCGATTGTGGCTCGA
CTGGAGAAGATTCCAGGCCTGGGTCTGTTTGGAGCTCTTATTTCCGATTACCTGTATTTG
TTCGATCGGTACTACTTCACCGCCTCTACTCTCTAAGCGATTGATGATTGGAAACACACA
CATGGGTTATATCTAGGTGAGAGTTAGTTGGACAGTTATATATTAAATCAGCTATGCCAA
CGGTAACTTCATTCATGTCAACGAGGAACCAGTGACTGCAAGTAATATAGAATTTGACCA
CCTTGCCATTCTCTTGCACTCCTTTACTATATCTCATTTATTTCTTATATACAAATCACT
TCTTC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E16599g_CDS-001

Protein length: 392 aa.
Product: Peroxisomal membrane protein
Gene: PEX16

>YALI0E16599g_CDS-001 MTDKLVKVMQKKKSAPQTWLDSYDKFLVRNAASIGSIESTLRTVSYVLPGRFNDVEIATE
TLYAVLNVLGLYHDTIIARAVAASPNAAAVYRPSPHNRYTDWFIKNRKGYKYASRAVTFV
KFGELVAEMVAKKNGGEMARWKCIIGIEGIKAGLRIYMLGSTLYQPLCTTPYPDREVTGE
LLETICRDEGELDIEKGLMDPQWKMPRTGRTIPEIAPTNVEGYLLTKVLRSEDVDRPYNL
LSRLDNWGVVAELLSILRPLIYACLLFRQHVNKTVPASTKSKFPFLNSPWAPWIIGLVIE
ALSRKMMGSWLLRQRQSGKTPTALDQMEVKGRTNLLGWWLFRGEFYQAYTRPLLYSIVAR
LEKIPGLGLFGALISDYLYLFDRYYFTASTL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG