YALI0E16621g

Overview

Description weakly similar to uniprot|Q04472 Saccharomyces cerevisiae YMR115W (ohnolog of YKL133C)
Locus type CDS
Locus tag YALI0E16621g

Location

Species Yarrowia lipolytica Positions 1968673..1970292
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1620 (nuc.)
Previous locus YALI0E16599g Next locus YALI0E16654r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E16621g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E16621gYALI0E16621g_mRNA-001YALI0E16621g_CDS-001

Nucleotide sequence

 

>YALI0E16621g
ATGCTCCGATTATCGCGAGTCGCTCAGCTGAGGGCTATTCCGATCCGCCGGGCCATGCCG
CCAATCATGGTCCGAAACTACGCCGTGCCTCCCAAGACCAATTTCCAGAAGGGCGACATT
CCCCCCGAGCCCAGTGGGTCGTCCTCAAGTGGCCCCAAATCGTACTTCCAGAACGGCGAA
ACCCCCCCTCCTCCCTCCGGAGCTGCAGGACGAATCCTCGTGGCCGAGCCCGTCTCCAAG
GTCCGGTTTAGAACTATCTTGCTCCTCCTGGCAGCCATCTCCGGCTTCACAACATGGTAC
TTCTACCCTCGACACACCTTCACCCCGGAAGTCGCCACCATTCTGCGAAAGGCGCTCAAG
GCCGAGAGCGAAAGCTTTGGCGGCCAAAACCTCCCGGAGGCCGTCAAGTATTACATTGAG
GCACTTATGGAGGCCGAGGCCCAAGGCCTGTCTCCCTTGTCGGACGAATACACAGGCATC
CAGCTCAAACTGGCAGAGATCTACGAGATGCTCAACTACCCGGACGCTGCCCACGACGTG
TACATGGAGATTTGTGCTGCCTACGTTGACGCCTTCCAGAATAACAAAATCGCCCAGGAT
GTCCGGCCCCAGGTGATCCAGAGAGGTCTGCGGATCGCTCTCAAGCTCGCTCACATTTCT
GGAACCGAGAAAAATGATGTGGTATCACGAGCGCTACTGCTGCAGATCCTGCTGGCTCAA
GAAGAGGTCTGTCGACGGTGCCCCGAGGCCACAGATCTGCTGAAACTCGCCAGCACGCCC
CCGACACAGAGCGAGCGGGAGTTCATGACCCAGCTGACTAAAAGTGCGTCTCATGCTCGT
CTGCTGCGTGCTTCCGGCAATTACGACGCCTGGATGCCCTTCAGAGACGAGCTTATTGCT
GCTCGTGATGTGCTCACAACTCACAACCTCTCTGACGCCCTCGCCAACGTTGCTCTCAGA
GAGAAGCAAATCACTTATCAGATCATGCTTGCTTCCGGATGTGGAGTGGGAGATCTGTTG
TTAGCCCAAGCCAACCTAGCCTCCATGTTCTACCTCATGTCTGAACAGCTGGAGGTGATT
GTTCACACTGCCGAAAAGAACGAGGGCACCACCATCAAAGCTGACACAGGCGGCGAGATT
CCTCTGGACACAATGAAGACGAGCAGTAATAACGCCCTGGCTCGATCCGAGTCATGTTAC
AAGCGTGTTCTCAAGGCCATTCCTTCTCTTGAGCCCGATGTCCGACGGACCAAGGAAGTC
GAGGAGGCCCAGGCTCTATGCACATATGGAGTCGGTGTGATTGCTATCAAGAAGGGCGAT
TATGAAGAGGCTAAAGACAAGCTTCGAGAAGCCCGAACTCGAGCCAAGGGTTCTGGTTTT
GATGATCTGGTCGAGGCTGCTGACGGAGAGCTCAACAAGGTTGATGGTCTGGCGCGAAAG
GCGTTGAAACAGAATGAGCCAGACAGCAAGGACAAGGTGGCCAACAGCAAGGAGTCCAAA
AAGCCCTCTATTGACGAGATCCACGATGTTATTGCTCATGAGGTTTCCGAGCTCGATGCT
GGGAAGAAGAAGTGATTTGTATATAAGAAATAAATGAGATATAGTAAAGGAGTGCAAGAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E16621g_CDS-001

Protein length: 525 aa.
Product: Conserved hypothetical protein

>YALI0E16621g_CDS-001 MLRLSRVAQLRAIPIRRAMPPIMVRNYAVPPKTNFQKGDIPPEPSGSSSSGPKSYFQNGE
TPPPPSGAAGRILVAEPVSKVRFRTILLLLAAISGFTTWYFYPRHTFTPEVATILRKALK
AESESFGGQNLPEAVKYYIEALMEAEAQGLSPLSDEYTGIQLKLAEIYEMLNYPDAAHDV
YMEICAAYVDAFQNNKIAQDVRPQVIQRGLRIALKLAHISGTEKNDVVSRALLLQILLAQ
EEVCRRCPEATDLLKLASTPPTQSEREFMTQLTKSASHARLLRASGNYDAWMPFRDELIA
ARDVLTTHNLSDALANVALREKQITYQIMLASGCGVGDLLLAQANLASMFYLMSEQLEVI
VHTAEKNEGTTIKADTGGEIPLDTMKTSSNNALARSESCYKRVLKAIPSLEPDVRRTKEV
EEAQALCTYGVGVIAIKKGDYEEAKDKLREARTRAKGSGFDDLVEAADGELNKVDGLARK
ALKQNEPDSKDKVANSKESKKPSIDEIHDVIAHEVSELDAGKKK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG