YALI0E16577g

Overview

Description some similarities with uniprot|P34233 Saccharomyces cerevisiae YKL185w ASH1 negative regulator of HO transcription
Locus type CDS
Locus tag YALI0E16577g

Location

Species Yarrowia lipolytica Positions 1963367..1964739
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1373 (nuc.)
Previous locus YALI0E16555g Next locus YALI0E16599g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E16577g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E16577gYALI0E16577g_mRNA-001YALI0E16577g_CDS-001

Nucleotide sequence

 

>YALI0E16577g
ATGGAAGTCGCCCGACAAAGCCTCGAACCATTCGCGTTCGCTGCCAACAAACGGCCACTG
GACATGGTCGACTCTGACGAGCCCCGATCAGACAGATCCGAGAAAGCAAACCTCCGTCGA
CTCGCCATTGTCAACGAACGCCGACAGTACGAAGAGACGCTCAAACCAGACTCGTCGGAC
ACAGAACCTGCCGCTGCCACAGCCGCTGAGCAGCCCGCCGCCAACTCGCCTCCCGCCGTC
GAAATCGACCCGTCGTCAGGCCTACACGTGCCCACCCTACGAGCCACCTCGGTGATCCCG
TCCTTATCGCTCATGTACGCCGACACGGCTCCTCGAGACGTGTGGAGACCGCAGATCGAG
GCCTGGATGAAGAAGTCCGGCCACCGAATGCGCGACGTGGAACGGGCCGTCGAGGCGTCC
GACAAGCTCGACGACAAGTATATGCTCAAGGACCCCAAGCCCGTGGCCAAATCCAAGGCA
GGCCCTGTCGCAAAGACATCCACTGTCGTGGATGAACAACTACCCCCACAAACGGCATCC
ATCACCATGCCCTCGCCACAGATCCACAGCAGCGCACACGTTGTCAGCACCCCACAGATC
ACAGAGCCACCCACGCTCAAACCCCCACAGTCCCCCATACAACACATCCCCCCACCCCCA
CACATGGCGTCTCCACACCCGTCACCTCATATGGAGACCTCAATGGTCGCCTCTCCGGCA
CTGTCGTCGCCTCCCAAACCCATCCACAGTGCCTCCACATACTCCACCCCCAGCTATGGC
AAGCGACGATGTATCAGTTGTGGATCGGACCAGAGTCCCTGCTGGCGCCCGTCGTGGTCT
GCATCAGCAGGACAGCTGTGCAACTCATGCGGTTTGCGGTACAAGAAGACTGGAGCCCGA
TGCACCGAGTCCGACTGTGGCCGGATCCCAGCCAAGGGCGAGTGGGCAGTTATGCGAAAC
ACGGCTAAGCGAAATCCGGAAACCGGCCGGATGGACTATGCATGCATTTATTGTCGAGGA
GTGGTGGAAGTGAATGAGAGGTTTTGAACTGGACAAGGCATGCTGGCCAGCTAACAACGG
CGAGAGATTGGAAACGAAGGACGAGACGAGACGAGACAGCGGACACAAGACAGTTCTTGC
TAATCACCACTGTCTGTGTTATGACCCGTCGACAAGCTCGTCAACCAACAGACTGACCTC
CCACCTCCCTCCACCGTGCAACGCTAACACTAACGCGTGGCTATTTTGTATGGAATAGCC
ATTGATGACTTATGATGGGTATTTTTTGGAATTGTTTTTTTTTGGTTTTTGATGTTATTT
TTGTCTTGATTGTTTTGTAAGTATAGAGTGATAAATGATGTTTAACAGAGGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E16577g_CDS-001

Protein length: 349 aa.
Product: Conserved hypothetical protein

>YALI0E16577g_CDS-001 MEVARQSLEPFAFAANKRPLDMVDSDEPRSDRSEKANLRRLAIVNERRQYEETLKPDSSD
TEPAAATAAEQPAANSPPAVEIDPSSGLHVPTLRATSVIPSLSLMYADTAPRDVWRPQIE
AWMKKSGHRMRDVERAVEASDKLDDKYMLKDPKPVAKSKAGPVAKTSTVVDEQLPPQTAS
ITMPSPQIHSSAHVVSTPQITEPPTLKPPQSPIQHIPPPPHMASPHPSPHMETSMVASPA
LSSPPKPIHSASTYSTPSYGKRRCISCGSDQSPCWRPSWSASAGQLCNSCGLRYKKTGAR
CTESDCGRIPAKGEWAVMRNTAKRNPETGRMDYACIYCRGVVEVNERF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG