YALI0E12221g

Overview

Description similar to uniprot|P32802 Saccharomyces cerevisiae YLR083C (ohnolog of YDR107C) EMP70 endosomal protein
Locus type CDS
Locus tag YALI0E12221g

Location

Species Yarrowia lipolytica Positions 1487259..1489240
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1982 (nuc.)
Previous locus YALI0E12199g Next locus YALI0E12243g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E12221g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E12221gYALI0E12221g_mRNA-001YALI0E12221g_CDS-001

Nucleotide sequence

 

>YALI0E12221g
ATGTTACACGTTTACGTCGTGCTTCTGTTAGCGGCACTATGTCACGCGTTCTATCTGCCC
GGCGTGGCCCCCACAGACTATGAGGAGGGCGACAAGGTGCCTCTCCTGGTTAACGCGCTG
ACTCCTCGACAGATTCTGTCCGAGTCCGGTCAGCTGGAGTCTGTTGTTCCCTACGACTAC
TACTACGAGCTGTTCAACTTCTGCAAGCCTGTCGGAGGCGCCGAGAAGCAGAGCGAGTCT
CTGGGATCCATTCTGTTTGGCGACCGAATCTTCAACTCGCCCTTCCAGCTCAACATGAAG
GAGGACAAGCAGTGCGAGGAGCTGTGTCCCAATCGACCCATTTACGACGTGTTCTCCGCT
CGTTTCACCAACAAGAAGATTCTGCAAGGTTACGCGCAGAACTGGTTCATCGATGGTCTT
CCTGCCGGCCGACAGCTGCGTGGCCAGGAGGGACAGTTTTTTGCCGGCTTTGAGCTCGGA
GAGATTGAGCAGCCAAACGCCGACAACACCGACGACGTGGATGACTCTGAGAACAATGAG
AAGCGAGACGAGGATTCCGACATCCCCTACCTCAACAACCACTACGACATCACTGTGGAG
TACCACACCACCAAGCAGGGCAAGCACCGAGTGGTTGGCGTGGAAATTCTGCCGCGATCT
CTCGACCGATCCGGCGCCGAGGAAGACCTCTGTGGTGACTACCCCAAGCTGCATCTCCAG
ACTGATCCCGATACTAAGCAGCAGGTGGTTTTCACCTACTCGGTCACCTGGAAGCACTCA
GACACCCCCTGGGCCACCCGATGGGACAAGTACCTCCAGGTCCACAACCCCCAGGTCCAG
TGGTTTGCCATCATCAACTCCGCCATCGTCGTCACTCTGCTGGCTACTACTGTTGCTACC
GTTCTGACCCGAGCTCTGCGAAAGGACATTGCCTCCTACAATGAGATTGATCTGTCTGAG
GAGGTTCAGGAGGACAGTGGATGGAAGCTCGTGCATGGAGACGTGTTCCGAACTCCTAAG
AACCGAATGATTCTGTGTGCCTTTTTGGGTTCTGGAGCTCAGATGTTCGTCATGTGCGGC
CTCACAGTCTTCTTCGCCGTCATTGGATTCCTTTCGCCCTCCAACCGAGGAGCTCTTGGA
ACAGCCTTCATTCTCTTCTACTCTCTGTCTGGCTTTGTCGGGGGCTACGTGTCTCGAAAG
TTCTACAACACCATGGGCGGTGAGAACGTGAAGATGAACCTTCTTCTGACCCCCGTGCTT
ATCCCCTCCATCATCTTTGCCGCCTTCATTGGTCTCAACTTCTTCCTGATTGCCTACAAC
TCTGCTGGAGCCGTTCCCTTCGGTACCATGCTTGCTCTGGTTGCCGTGTGGTTCGCCATT
TCTGTTCCTCTGTCCATTGCTGGAGGTTTCATCGCCAAGACTCCCTTCTCTGTGCCTGTC
AAGACCAACCAGATCCCCCGACAGATCCCTCAGCAGCCCTTTTACCTGGAAAAGGTCCCC
TCTGTGGCCATTGCTGGTATTCTGCCCTTTGTGGCCATCTTCGTCGAGCTGTACTTCATT
GTCAGCTCCATCTGGTTCCACCGAATGTTCTACATGTTCGGCTTCCTGTTCCTGTCGTAC
GGTCTCATGCTGGTGTCCACCGTTGTTGTCACTGTGCTCATGATCTACCTGCTGCTGTGC
TCCGAAAACTACCACTGGCAGTGGAGATCTTTCTTCATTGCCGGCTCGTGCGCCTTTTAC
GTGTACGCTCACGCTCTGCTGTTCCTCATCAACAAGCTGGCTCTGGGCTCCTTCACCTCC
AACATTCTGTATCTCGGCTACTCCGCCATCATTTCCCTCATTATGTTTGTGCTGCTCGGA
ACCGTGGGCTACACCTGTTCCTTCTTCTTTGTGCGAAAGATCTACACCGCAATCAAGATT
GATTAGACAAGTTAGCATGGCGGTTGTAAAATCTCCCAATAAAATTTTATGAATATTACT
GA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E12221g_CDS-001

Protein length: 642 aa.
Product: Protein with a role in cellular adhesion and filamentous growth, putative

>YALI0E12221g_CDS-001 MLHVYVVLLLAALCHAFYLPGVAPTDYEEGDKVPLLVNALTPRQILSESGQLESVVPYDY
YYELFNFCKPVGGAEKQSESLGSILFGDRIFNSPFQLNMKEDKQCEELCPNRPIYDVFSA
RFTNKKILQGYAQNWFIDGLPAGRQLRGQEGQFFAGFELGEIEQPNADNTDDVDDSENNE
KRDEDSDIPYLNNHYDITVEYHTTKQGKHRVVGVEILPRSLDRSGAEEDLCGDYPKLHLQ
TDPDTKQQVVFTYSVTWKHSDTPWATRWDKYLQVHNPQVQWFAIINSAIVVTLLATTVAT
VLTRALRKDIASYNEIDLSEEVQEDSGWKLVHGDVFRTPKNRMILCAFLGSGAQMFVMCG
LTVFFAVIGFLSPSNRGALGTAFILFYSLSGFVGGYVSRKFYNTMGGENVKMNLLLTPVL
IPSIIFAAFIGLNFFLIAYNSAGAVPFGTMLALVAVWFAISVPLSIAGGFIAKTPFSVPV
KTNQIPRQIPQQPFYLEKVPSVAIAGILPFVAIFVELYFIVSSIWFHRMFYMFGFLFLSY
GLMLVSTVVVTVLMIYLLLCSENYHWQWRSFFIAGSCAFYVYAHALLFLINKLALGSFTS
NILYLGYSAIISLIMFVLLGTVGYTCSFFFVRKIYTAIKID*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG