YALI0E12243g

Overview

Description similar to uniprot|P40069 Saccharomyces cerevisiae YER110c KAP123 RAN-binding protein
Locus type CDS
Locus tag YALI0E12243g

Location

Species Yarrowia lipolytica Positions 1490125..1493322
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 3198 (nuc.)
Previous locus YALI0E12221g Next locus YALI0E12265r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E12243g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E12243gYALI0E12243g_mRNA-001YALI0E12243g_CDS-001

Nucleotide sequence

 

>YALI0E12243g
ATGGACGACTTCACGGTGCAACTAGCCCAGCTTCTGGGCCAAATCACGTCCCCCAAATCG
CCTGAGGACATCAAAAATGCGTCTCAGCGACTGCAGGCCGAGTTCTACATGAACCCTCAG
TGTGCCGTGTCTCTGATCCACATTATGCAGAAGCACGAGGACTCTGGAATCAAGCAGCTG
GCTGGAATCGAGGCCCGAAAGCAGATCCCCATTTACTGGGAGGAGAACGATCAGGCCGTT
CGAAACGAGATCAAGAACTCGCTTCTCCAGTCCACTCTGGCCGAACAGGTGGCCCTTGTA
CGACACACCTCTGCCCGTGTTGTGGCTGCCATTGGAGAGATTGAGCTGGGTCTGCAGACC
TGGAATGAGCTCCCCCAGAGCCTCAACACCGCAATCAGCTCTGGAGACGCCCGAGATCGA
GAGGTCGCTACCTACATCATCTACATTCTGCTTGAGGTGGGTGCCGAGACCTTTGTGACC
AACGCCTCCAACATTCTTCCTCTGGTGTCCGTCAACATGGCTCAGAACGACGCCGAGCTG
CAGGTTACCTCCATGCTGTGCGCTGGTATGATCTCAGAGCTGATTGACTCTTCCGACTCT
AATGCCGACATGTTCAAGAAGCAGGTGGTGCCCCAGATGGTCGATGTGCTCAAGGGTGCC
ATGCAGCGTGACGACGACAAGACCCTGCAGCTGTTTGAGGTCTTCTCAACCCTGCTTCTC
ATCGAGGGCGCTCTTGTGGCTGATCACATTGGCGACCTCGTCCAGTTCATGCTGGAGATT
GCCAAGCGAGGCGACTCTGACGAGAACAAGATGGCCGCTCTACGGTTCCTGATCTCTGCC
GTGCGATTCAAGAAGCGACGACTGCAGGCTCTGGGTCTTGGGCCCACTCTCACCAACTCC
ATGGTCGAGATCATTGCACAGCAGATTGCCGAGTTCCCCGACGAGCAGGACGACGATGAT
GAAGATGAGGATACTACCCGAAAGCTTGCTCTGCGAGTCATTGGTTATCTGTCCAACGAG
CTGCCTCCCAAGCAGGTGCTTGTCCCCATCTTTGAGCTTCTGCAGCAGCAGCCCAACTCG
GACGCTGTGCTTTCTGCTCTCTCCTACGCCATTGAGGGATCTCCCGAGTTCGTGGCCACT
CACCTGGACCCCGTTCTCGAGTCTGTCATTGGCACTCTCCGACAGAACCCCACCAACGTG
TCTGCTCTGATGGTTCTTGTCCGTCTGGCCTACCACCTGCACCACATTATTGGTGAGCAC
CACGCTACTCTGGTGCCTCTAATTTGCTCTGCTATGGATGCCTCTTCTTCCCCCGCTCAG
TTCAAGGCTGCCACCTCTGCCCTGGAGTCTGTGCTTGAGACTCTCGAGCAGGACGTCATC
GCCGAGAAGTACCTGGCCGAGCTCATGCCCCGTCTCATCACCATGCTGGACCAGGCCCAG
GACGACTCTCTGCGAACTACTCTGATCGCTGCTGTTGGTTCCGCTGCTTTCGCTGCGAAG
GAGGCCTTCACTCCCTACGCCGAGCAGTGCATCAACGGTCTTGGCCAGCTTATCAACCTC
GAGAATGCCGCTGAGATGACCGAGGTCGAGCTCGCCGTCAAGGGCTCCGCCTTTGACACT
ATCGGCGCGATTGCCGGCGCTATTGGCAAGGAGGCCTTCCGACCCTACGTCAACACCTTT
GCCGAGAAGGCCTATGCTACTCTGCAGGTGGATCTGCTGCGAGAGGCCGGCTTTGTTTTC
TTTGGCGTCATTGCCAAGCTGTACGGCGAGGAGTTTGGCCAGTACCTTCCTCGAGTTATT
CCTCTGCTTGTCGAGTTCCTGGGACAGGACGACTTCGGCTTTGAGGATGAGGATGAGGAT
GATGAGGCTATTGGACAGGAGGACGACGACTCCAAGTTCAAGGTCAACTCGCTGCTGGCT
ACCCAGAAGGAGACCGCTTTCCAGGTGCTTGGCGACATGATCCTCGCCACCAAGGGCCAG
TTCCTCAACTTCCTGGAGGAGATCACCGATCCCCTGTTCTCTGCTCTCGACCACTTTTAC
GAGGGTATTCGAAAGGAGGCTCTGGGCGCCGTGTGGAAGATTTTCCACTCTCTCTACAGC
ATGGCCAACCTTCCCCAATGGAAGCCCGGTTTCCCTGCGGACACCTCGGCCTACCCCGAG
TCTCTGTCCACCTTCCTGCAGCTTGCTCGAACCAAGACCGTCGAGCTTCTGGAGGAGGAG
GACTCTCGACTGGTGGTAATTGCCATCTGCGAGGTGCTTGTTGAGGCCATGAAGGCCGCT
GGACCCGCCATTCTCGGCGACGAGGACACCCTGCGAACCATTTGCTCCCAGGTGATCCTT
GTGCTCAAGAAGGAGCACCCCGCCCAGATGGAGGAGGAGGAGATTGACGCTGCCGAGCTC
GAGCAGTCCGAGTACGACTCCCTCATGCTGGACTACGCCTTTGACGTGTGCGCAGCCATG
TCTGAGTCTCTCGAGGCTCACTTTGTGCCCATCTTCAAGGCTCTATTCCCTTACGTGCAG
AACTACGCCAACTCCAAGATGGATGAGGAGCGAGCCTTTGGCATTGGTGCTCTGGCCGAG
ATGACTGTCGGCATGAAGTCCTCCGTCTCCGAGTTCACCGGCGAGATTCTCAACATCTGC
ATCAAGGGTCTCACCGACGCCCATCTCGATGTGCGATCCAACTCCGCATTTGCATTTGGT
GTGTTGGCCGAGAACTCTACTGTCGACCTCACTTCTCAGTACCCTGCCATCCTCCAGAAG
CTGCAGCGCCTGCTCACCAAGGTCGACAAGCAGGCCAAGAAGAACCTGTCGGACGACCCC
GAGGACAACAACGACCGATGTCTGGCCAACGCCTGCGGTTGTGTCGCTCGAATGACCCTC
AAGGCTCCCGGCTCCGTACCCATCAGCGAGGTGGTGCCTGCCCTGGTGGCTCGTCTGCCT
CTGGGCGACGGCCAGGAGGAGTATGTGCCCATTTTTGGCCTGTTTGCCGCTCTGCTGGAG
CACAACGACCCCACTATTGTGCCTCTCAAGGGTGACATCTCCAATCTGATTCAGGAGATT
GCCCGAAAGGACGAGACAGAGAAGATCCTGGACGACCAGGTCAAGCAGAAGCTGGAGGCA
GTGATGCAGAAGATGTAGAAAAGTGGCTAGGTGGTCGAGACTATGCTAGATGATTTAATA
GATGTTTTATTTATACGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E12243g_CDS-001

Protein length: 1046 aa.
Product: Karyopherin beta, putative

>YALI0E12243g_CDS-001 MDDFTVQLAQLLGQITSPKSPEDIKNASQRLQAEFYMNPQCAVSLIHIMQKHEDSGIKQL
AGIEARKQIPIYWEENDQAVRNEIKNSLLQSTLAEQVALVRHTSARVVAAIGEIELGLQT
WNELPQSLNTAISSGDARDREVATYIIYILLEVGAETFVTNASNILPLVSVNMAQNDAEL
QVTSMLCAGMISELIDSSDSNADMFKKQVVPQMVDVLKGAMQRDDDKTLQLFEVFSTLLL
IEGALVADHIGDLVQFMLEIAKRGDSDENKMAALRFLISAVRFKKRRLQALGLGPTLTNS
MVEIIAQQIAEFPDEQDDDDEDEDTTRKLALRVIGYLSNELPPKQVLVPIFELLQQQPNS
DAVLSALSYAIEGSPEFVATHLDPVLESVIGTLRQNPTNVSALMVLVRLAYHLHHIIGEH
HATLVPLICSAMDASSSPAQFKAATSALESVLETLEQDVIAEKYLAELMPRLITMLDQAQ
DDSLRTTLIAAVGSAAFAAKEAFTPYAEQCINGLGQLINLENAAEMTEVELAVKGSAFDT
IGAIAGAIGKEAFRPYVNTFAEKAYATLQVDLLREAGFVFFGVIAKLYGEEFGQYLPRVI
PLLVEFLGQDDFGFEDEDEDDEAIGQEDDDSKFKVNSLLATQKETAFQVLGDMILATKGQ
FLNFLEEITDPLFSALDHFYEGIRKEALGAVWKIFHSLYSMANLPQWKPGFPADTSAYPE
SLSTFLQLARTKTVELLEEEDSRLVVIAICEVLVEAMKAAGPAILGDEDTLRTICSQVIL
VLKKEHPAQMEEEEIDAAELEQSEYDSLMLDYAFDVCAAMSESLEAHFVPIFKALFPYVQ
NYANSKMDEERAFGIGALAEMTVGMKSSVSEFTGEILNICIKGLTDAHLDVRSNSAFAFG
VLAENSTVDLTSQYPAILQKLQRLLTKVDKQAKKNLSDDPEDNNDRCLANACGCVARMTL
KAPGSVPISEVVPALVARLPLGDGQEEYVPIFGLFAALLEHNDPTIVPLKGDISNLIQEI
ARKDETEKILDDQVKQKLEAVMQKM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG