YALI0E12199g

Overview

Description some similarities with uniprot|P50108 Saccharomyces cerevisiae YDR245w MNN10 subunit of mannosyltransferase complex
Locus type CDS
Locus tag YALI0E12199g

Location

Species Yarrowia lipolytica Positions 1484247..1486180
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1934 (nuc.)
Previous locus YALI0E12177g Next locus YALI0E12221g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E12199g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E12199gYALI0E12199g_mRNA-001YALI0E12199g_CDS-001

Nucleotide sequence

 

>YALI0E12199g
ATGGACACGGCTAATCAGGAACACTTGCGACGGTCCTTTGGCGCAGCATCTCTTTCTCCA
CCAGCAGCTTCGCCCGCCCTGCATACCAAACCCATGTTTCGCCGGCGCTTTTCCACCACT
CTTCTTCTGCTGGGGGCCTGTGTGTGTCTGCTGTTTCTGGCAGCGTCACAGTCCCGTCTG
GACCTGGATGTGCCCTCTTACCATGGCTACCGAAAGTCCAAAGAGGTGACGGACGAAAAG
TTGCATGTTCACAAAGAGCGTCCTCAGGAGGAGCATCACGAACATGTGGAGCATAAGGAG
GAGTCCAAGGAGGAGATAAAGGAGGAGTCCAAGGAGGAGTCCAAGGAGAAGTCCAAGGAG
GAGTCCAAGGAGGAGTCCAAGGAGGAGTCCAAGGAGGAGTCCAAGGAGGAGTCCAAGGAG
GAGTCCAAGGAGGAGTCCAAGGAGGAGTCCAAGGAGGAGTCCAAGGAGGAGTCCAAGGAT
AAGTCCAAGGAGGAGTCCGAGCCTGTGGCGGTAGAGCCCGAAAAGAAGCCTGAGCAAAGT
CCTGAACAGGCGGAGGAGGAAAAGAAAAAGGCCGACGAGCTCAAGGTCCAGGAGGACCGT
AAGAAGACCGAGGAAGACAAGAAGGAGGAGGAAAAGCGACTCAGAGAGGAGGAGAAGAAC
GGCCGAATCGACCGGCTGGCGGAGGACGAGGAGCAGTTCAAGAAAACAGAGGCCAAACTC
AAGGCGGCGGAAGAAAAGGCAAAGGCCATGAAGGAGGAGCTGGAGGAGGCACGAAAACGA
AAGGAAGAGAGACGAAAGAAGGCCCAGGAGCAAAAGAGTGAAAAGTTACAGGGAATCTTC
CACAAGCTGGAAGGAGAGGAGATCGGATCCATCGTCAACAAGCCTCTCACTTACACGGAC
GAGGAGAAAGTGGACGGTCATGTCCAGCCCTACGGACCCAAGATTGCGCTTTTGTCTGCA
TCCAACGGAAAAACGGACAACGAAATGGCCATGCTGGAACTGGTGCTACCCAACCGACAG
GAGTACTGCAACTACCACGGCTACATTTGTGCGTTTGTGGATCTCAACACTGTCGACACC
GGTTCGGATCACGTGGTGTGGGCCAAGATGGGTGCTATTCAACGTGTCTTTGACGAACAT
CCCGAAGTCGAGTGGGTCTGGTGGATGGACACTGATATCTTCCTCATGAACCCCGAGATC
GAGCTTGGTGAGCATCTGCTGAGTGACCGAGCTCTGGTGGAACGACTCACCTACGCTCGT
CCTATTCGAAAGCCCGATGCCACCTTTGATGGAGAAGTCTACCCTTCTAAGGACAATCCT
CCCAAGCCCGAGAACCTCAATCTGCTGTTGACACAGGACTTTTTCGGTATCAACGCCGGC
TCGTTCTTCATCAAGCGGTCTCCTTGGACAGACATGTTGCTTGATCTGTGGTATGACCCC
GTCCACGTGGAGAAGAACTACATCTTCAAAGAGCAGGAGGCTCTTAACAACCTGATTCGA
GGCCACAAGTCCATCTTGTCGCACACTGGAATCTATCCCCAGCGTCTGTTCAATTCGTAC
ACTGGTGAGCCCAACGACGTGTGGACCTACAAGGAGGGTGATCTGGCACTGCATCTGGCC
GGCTGCAACCACAATAACGACTGTGAGAAGCATCTGACTGGCTACTTTCCTCAGAGAGTC
CGGGTTCCTGAGAAGTACAGGGAGTCTGGACTTAGAGTGGATTTTGGAAAAAAGAAGGAG
GGCAACTAAGCGAATAGCCCACAAGCCAAGAGTGCAACAACACGAAGATGGGCACGAAGA
GTACCCTTACTTTTGCCTACTTGTAGTTGTACTAGTATCTTTATCCAAAGAGCACCAAGA
CAATGCATCAACCGTTCTAGAGCATCATTAGAAGATGCCATTAGAATAGATTAATAAAAG
GATATTATTTTGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E12199g_CDS-001

Protein length: 583 aa.
Product: Conserved hypothetical protein

>YALI0E12199g_CDS-001 MDTANQEHLRRSFGAASLSPPAASPALHTKPMFRRRFSTTLLLLGACVCLLFLAASQSRL
DLDVPSYHGYRKSKEVTDEKLHVHKERPQEEHHEHVEHKEESKEEIKEESKEESKEKSKE
ESKEESKEESKEESKEESKEESKEESKEESKEESKEESKDKSKEESEPVAVEPEKKPEQS
PEQAEEEKKKADELKVQEDRKKTEEDKKEEEKRLREEEKNGRIDRLAEDEEQFKKTEAKL
KAAEEKAKAMKEELEEARKRKEERRKKAQEQKSEKLQGIFHKLEGEEIGSIVNKPLTYTD
EEKVDGHVQPYGPKIALLSASNGKTDNEMAMLELVLPNRQEYCNYHGYICAFVDLNTVDT
GSDHVVWAKMGAIQRVFDEHPEVEWVWWMDTDIFLMNPEIELGEHLLSDRALVERLTYAR
PIRKPDATFDGEVYPSKDNPPKPENLNLLLTQDFFGINAGSFFIKRSPWTDMLLDLWYDP
VHVEKNYIFKEQEALNNLIRGHKSILSHTGIYPQRLFNSYTGEPNDVWTYKEGDLALHLA
GCNHNNDCEKHLTGYFPQRVRVPEKYRESGLRVDFGKKKEGN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG