YALI0E12177g

Overview

Description weakly similar to uniprot|P46944 Saccharomyces cerevisiae YDR108w GSG1 sporulation specific protein
Locus type CDS
Locus tag YALI0E12177g

Location

Species Yarrowia lipolytica Positions 1481283..1483082
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1800 (nuc.)
Previous locus YALI0E12155g Next locus YALI0E12199g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E12177g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E12177gYALI0E12177g_mRNA-001YALI0E12177g_CDS-001

Nucleotide sequence

 

>YALI0E12177g
ATGTTTTCACTCTTGCTTCAATCGTTTGTCTGTTGTCGTTTTCTGTCTTCCCTTTGGCTC
TCCCAGCACTCGGTCGTCTGTCTACTACTACAAGTACTACTAACACACATCACCATATCA
AACTCACAACATAACACTCCCAACCCAACTATGATGAAGTCGATAGTGGCAAGGGCGTAC
TCGCCGTTCTGCTCCGTGTTCGCCACGGAAGACTGCGACAAACTCGCCAACGATCTCGGA
TACGAAGATCTCATCACTCTTCTGGCCCCCCATGGAGACTCGGTAGGAAGAGCCACAGTT
CGAGACTCCCAGGGCATGACCAACACGTACGACGACTTTGCCATTCGACTGGGTGCCAAG
CGACCCACCGAGAGAGACTCTGGCGGCATGCTCTTCAACCCGGACGCCATGGAGGCGCTT
CTGAGAGAGTACATTGGTCACTACAACTCTGACGATTCTGCATTTGCCCGGTTTTTCGCC
AAACTGGTGGCTGCTCCACCGGACACGGCATTTGAGACCTTTTCTCAACCGGCTGCGCAT
CTCTTTTGTGTCTCCAGCAGAAACGCGCATCCTCTGGACACGTTGCAGGCTTTGGCCCAG
GGCCAGAAACGCGATAAGGACTGTCTCAACTTTTATGTGCTGGTGCACGATGCACGTGTG
GAGGACGCCGAGAACTCGACGCAACGAACCATTGCGTTGCTGGAGCGGGCCAAGAAGCGG
TTTGGACTGGCTGGTATGATCAAACTGGGCCAGGAGGGTGTTCCGGAGACGATCCCCACG
CCGCAGTTTCTGACCGTGGGCGATGAGCTGGTCAATCTTAAGACTGGAGTGGGATTCGGT
TCTCGGACCTTGTCTCAGCCTGACAAGGAGAGTATTCGGTCGCTTTTGAGAGAGTTTACC
GTACAGCATCTTATTCCGCACATGGAACGGTGTATCATGACGTGGGATACGGTGGCAGCC
GGAAAACGAGGACTAACAGGTCGAATGTTTTCCGCGGGCAAAAAGTGGCTCAAGTTCGGA
GGAAGCGAGAAACAGGAGGCAGGATCATCCATCCAAGCATCGGGAATCTACCCCCAGGGG
TCTCCAGAACAGACGATTCGACGTTTGGCAGATTATGCGTTCATGCTGAGAGACTACAGA
TACGCATATGCTACTTACGAGCTGGTAAAACGGGATTTCCTGTCGGACAAGGCGTGGAAG
TACCTTGCAGCATGTCAGGAACAGGCAGCAGTGGCCCTTCTCATGTACACTACTCGTCTG
ACGGAGAAACAACGGGTTGAGGTGCTGAACCCATTGCTGGACTCAGCATGCTATACATAT
ATTTCGCGGCTGCAATTACCACAGTATGCGCTTCGAATGCTGGTGGTAACTTCGGACCTG
CAGTGTCTGCTTGGTCCTGACGCTGCTTCACAGGGGGCAACTCAGTGGTTCCAGAAACTG
TTGGATGAGCGGCTGGTGGGCCGTTTGGGTTATGCTCTCATCATGTTGCGGGTATCGTAC
GCCTTTTCACAATCTCCCAAAGGCAGAAAGGCGGCTCTGTGGCAGTTGTTGTCTGCTCGT
GAATGGGCTGATGCCAACCAGAAGGGTGAGATGGCAAAGTGTCTAGACATGACAGCGCCG
GTTTATGACGAGTTGAACTGGCCAAACAACGAGGGGACATTGTTGACTAGGTTAAAGGGG
GAACTTGCCAACGAGGCTAAACCTACGAGCGTGGCGAGCTGAGTAGCAAGATGACGTGAC
TTATCCAGTCCACTGTGGTGCTCTTCAACCGCATTTAATGAATTCCATGACTTTTATGAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E12177g_CDS-001

Protein length: 574 aa.
Product: Conserved hypothetical protein

>YALI0E12177g_CDS-001 MFSLLLQSFVCCRFLSSLWLSQHSVVCLLLQVLLTHITISNSQHNTPNPTMMKSIVARAY
SPFCSVFATEDCDKLANDLGYEDLITLLAPHGDSVGRATVRDSQGMTNTYDDFAIRLGAK
RPTERDSGGMLFNPDAMEALLREYIGHYNSDDSAFARFFAKLVAAPPDTAFETFSQPAAH
LFCVSSRNAHPLDTLQALAQGQKRDKDCLNFYVLVHDARVEDAENSTQRTIALLERAKKR
FGLAGMIKLGQEGVPETIPTPQFLTVGDELVNLKTGVGFGSRTLSQPDKESIRSLLREFT
VQHLIPHMERCIMTWDTVAAGKRGLTGRMFSAGKKWLKFGGSEKQEAGSSIQASGIYPQG
SPEQTIRRLADYAFMLRDYRYAYATYELVKRDFLSDKAWKYLAACQEQAAVALLMYTTRL
TEKQRVEVLNPLLDSACYTYISRLQLPQYALRMLVVTSDLQCLLGPDAASQGATQWFQKL
LDERLVGRLGYALIMLRVSYAFSQSPKGRKAALWQLLSAREWADANQKGEMAKCLDMTAP
VYDELNWPNNEGTLLTRLKGELANEAKPTSVAS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG