YALI0E12155g

Overview

Description weakly similar to uniprot|Q9Y7U5 Schizosaccharomyces pombe SPCC645.06C, TUS1 similarity to GDP-GTP exchange factors
Locus type CDS
Locus tag YALI0E12155g

Location

Species Yarrowia lipolytica Positions 1476687..1481070
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 4384 (nuc.)
Previous locus YALI0E12133g Next locus YALI0E12177g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E12155g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E12155gYALI0E12155g_mRNA-001YALI0E12155g_CDS-001

Nucleotide sequence

 

>YALI0E12155g
AGTGAGTACCCGCAGCGGACCACGTCTCACCCCCAGCGCCCTTCTAACACAGTGCATCCT
CCTCCATTACCTCCAAAGCCGCCTGCTGAGGTCATCAACAGACGGACCCAGGTGACGGAT
GAGTTCAGAACCAAACTACCTGAGCGAGTATCGTCGCTCGTGGACAAGCGACCGTCCTAT
CACCCGCAAGGACCACGCCAGCTCAACTCGGACGCGCCACAACAGACCAATCGGTACCTG
GGCGTCTACTCTTCGCCGCAAGCGCCAAACTGGAGAGATGAAGAGAGAAGCGTGGAAAGA
AGCAACACAGATTCGTCTGATAGAACGAGCGGCAGCGCCACCGACCGTGCCAGCTACTCA
TCTTACTCCACCGACCGAACCAGTATCCACGGCGGCGTCTCTGGCTACTACAACGACCCC
AACAATGGCAACAACATTGGCACCGACTACGATAAGTTCTGGGCCCAACAGTACTCGGAC
GTTAGCCGGACCAGCAGCATGCAGTCGTGGCGGCCCGACAGCGAACGACCGCCACCTCTG
CCCCTCAAAAAACCCGCATTGAACACCTCTCACAGATCTAATCCCGCGTCTCCAGGACGA
GCTCACTTCTCACAACAAAACACAAACACGCCCCCTCCACTGCCACCACAGATTCCCATC
TACGACACATACATGGAGCAGCAAGCATATGAGGACTACCTGGAAAATGGGTTCTACGAC
CAGCAATCACTATATCGTACCCCCGAGCCCCAGCACCCTGCGCGTCACTTTACTCCGTCC
CCAAACGCCCAGGACAGATACCAGATCCCTCCGCATTTGAGTCCAGGCCACAGCTCGTAC
CAACCGCCAGCTGACCTGCCTGCATTGGACACCAACGACTGGAGCCATGTGGCGTCTGCA
TACGAAACAGACAACATGTATCCGGACCATGCATACGAGTCTCCGGTGCGCATGCCTGTG
GCAGATGCCTACATGTCGCCTGGGAGTCCCAGTCCGTTGAAAACAGAGACATACTCGCCT
GCTCCGTCTCAGCAATCACCTCTGCATCACCACTCTTCGCAGTCGTCTTTGAACTACATG
ACGTCTCAGTCGTCTCCCTTGACTCCCCAGCAGTGTTCGGAACGAGATTTGGCTCTAAGA
ATGGAGCGACTGGATATGCGTCCTGCCATGGAACGATTGGAGCCTCGTCCTATGGTCGAT
CGAATTGATATGCGCCCCTCCATGGACATTCGACCAGTCGATATGCGACCCACACTGGAG
AAACGCATGAGTTTGCCCAACGGAATGCCCAAGTACCAGCCAATGTCACCTTCTGTGTCC
CCGTCGCGGTTCAACTCTATGCCCAACAAGCGACCTGTACCTGTATCTGCAGGAAACACT
CCCGTCAAGCAGCTCGACATTCCCGAGTACGATATTCTGTCGGACAGTATGCGGTCGGAT
ACCGCCTGGGTGGAGCTGGATCTCCCGTCCATTCCTACACGACCACAGGTGGATCTCTCA
AACGTGACGTACGCATGTCCTGAGATGTGGTCGCTGTCTGGCGTTCGAAACTGGATCCGT
CCTTTCTTCACAGGCGACAAGGAGGTGCCTGAGAAGGATTTGCATACGGCCGTTTCGAAT
CTCTTTGCCGCCAACAAGACCATGTCTCCTGTTTATGCTGAACAGTACGCCAAACACGTA
ATCGGAGCCCTTGGACGAGGCGACGTGCTTCGACATGATGAGGAGAGAGGCTCTTATATG
TTCAGCGACGAAGGTGTCGTTTCAGGAGTTATCCCAGCCCTCACCCTGTGCTATAGCAAG
TCGTCGCATGACTCTGGATACACTTGTTATTCCACAAAGTGCCCATATGAGTCCGACACT
CGGAAACGAGAGGACAAGAAGCGCACCGAATCTACATCCTCTGACCAGATGGACTGGGCG
CAGTACTGGGAGCTCACCGATGACCAGCTGGCTCGTATTGACCCCCGAGAAATCAAGCGG
CAGTACGCCATGCACGAACTCATCGTGGGAGAGGAGCACTTCATTCGTGACCTGGAGATT
CTGCACAACGTCTACGGCGAATCTCTCAAGTCACACATGCCCGACAAGCAGTTTCGGGAC
ATGTTTGCTGTTCAGGATATTATCCAGTGTTCCAAGGAGCTGCTCCAGGGCCGTCTCAAG
GCCAGACACATTATTTTTGTGACTGGTATTGCCGACATCATCATCGAGTGGATCAAGGTT
GCTCGTCCACACTTTCTTGCCTATGCGAACCGGTACTTGCATGCTGACCGGCGTATTCGA
AAGGAGCGCGAAGACAATGTTTTGTTTTCTCAGTGGCTGGGCGACATGTCGAAGGACCCT
CGGACGCTCGGAAAGCCCTACTCGATCTACTTTCATCGAGTTATCCCCCGTCTGGCTCGA
TATTCGCTTCTTTTGGGCACCATTTCGAAGCATACTACCAACGAGATGGAATTGGAGCTT
CTATCACGTGCTGTCGCCGAGTGTGATGACGTCACTCGACAATGTAACATGGTGATTGGC
AACGTCGAAAAGCAGGTGGAGCTGTTGGATCTCAAGAGCCAGTTTGTGTTTAAGCCCGAC
TGTGGTGCTGATCTGAAGCTTGAGAGCACTCAGCGAAAGATTATGCGACGAGGTGACGTA
CAGCGAAAGTCCGACTACGGCTTTGAGTGGATTGACGCTCATCTGGTGCTGTTGGACAAC
TTTTTGGTGCTGTGCAAGCATCAGACAGGTCAGCATGGTCCCAAATTGTATGTGACGAAA
AAACCCATTCCTCTGGAGCTATTGTGCGTTGAGCAGATTGACGAGGCCGAGCAGCAGACC
AAGGGCCGAATTCACAACATCACGTCGCATGTTCGAGAAGTCAGAGACAAGCGAATGAGT
TTCATTGGCGGAGATCATCACAGCAGCAGCTCCTCCAACCCCGGAGCAGTCACCGTGCTC
AACGAGGACTCCGATCAGACCACGTATCCTTTCCGAATTCGCCATCTCGGCCAGAACATC
ACCTACACCCTGTTCTGTCCGTCTTCTCTTGATCGAGACAGATGGCACACTGCCATGGTC
GAGGCCAAGCGTCAGTACTCCAGCAAGGTGTATGCCAAGAACGCCGAGCCCTTCCGGCTG
ACAGTTCTGTCATATCTCGACTTTGGATACGAGATTCCTGTTCGCCTGGCAGTCCCTAAC
AATGCCTCTACTCTCCAGAGAGCCATTGAAAAGGCCGGTATGGCCGGCAAGCCGCATCTG
AAGACCCAACCGTCTTCGACCAGCATGACTACTCGAAGCAAGGTCAACTGTGCTACGTCG
TTCATGTTTGATTCGCGTGAATTCGTTTTTGTCGGCACAGATTACGGTGTTTTTGTGTCC
GAGTTATCTCCCGAGACCCGTCACAAGGGCGGAAACAACAAGTACAAGCGGTGTGTCGAC
TTGCACAAGGTGACTCAGATTGGCGTGATTGAGACACTCAACTTGGTTATTATCCTGTGC
CACCGTGGACTAATCTACTACCATCTGGACCAACTGCTCAACCGAAGCATGACCAAGGAT
GCGGCCACCCCCATGGGCTACAAGTTGTCTTCCTCTGCGTCCTTTTTCACCATTGGCAAT
ATGAAGAACCGAACCCTGGTATTCTACAAGTCTCGCGAGGGTCTCAACTCGGTGTTCAAG
GTATTGGAGCCCATTCGGCAAAAGGGCTCTCAGAAGAAGCGATCTCGAATGTCGCTGTCT
CGGTTCTCGTCGCATATTGGGTCCACCGAGTACTTCAGGGACGCTGAGCGGTTCTACGTG
CCGTCCGAGTGCTGGGGCATCTCCGTGTTCAAAAACTACTTTTCGGTGCACTGTACCAAG
GGATTCGAGGCCATGAGTCTGGATTTCAAGGTGCCTCGAACACTACCCATCATCTCTTCT
GGCTCCACTGACCTCAGAAAGCGACTAGAAGGACTCAGGCCCCTGGCCATGTTCCAGATC
TCGGACTCCAAGTTCATGCTCTGCTATGACGAGCTGCTGGTGTACACGGATCACTTTGGC
AACCTGGCCTCCAAGCCCATTCCCATCATGATAAAGGCCAAGGCCGTGGCACTTCAACAT
CCCTACCTGGTGATTGTGGACGACGAGATGGCCGAGATTCGGCACATTGATGGTACTCTC
AAGCAGGTGATTCCTGGCCAGGATATGCGGCTTCTCGACGACCACGAAGGCCAGATCAAG
CTGTGCATGGCGAACCCCAATATTTACGGCCGCCAACTCATTGTCGAGCTCAACACCAAC
GAGCTTATTGTTGACGACGACGATTCGTCTCTCACGGGATTGTAAGAGAGAGTCGGACAG
TCCAAGTCCGTGTATACATAGTTTATTTATTGTCATGTTAATGTGAGCATTATATCGAAA
TTTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E12155g_CDS-001

Protein length: 1418 aa.
Product: Conserved hypothetical protein

>YALI0E12155g_CDS-001 MHPPPLPPKPPAEVINRRTQVTDEFRTKLPERVSSLVDKRPSYHPQGPRQLNSDAPQQTN
RYLGVYSSPQAPNWRDEERSVERSNTDSSDRTSGSATDRASYSSYSTDRTSIHGGVSGYY
NDPNNGNNIGTDYDKFWAQQYSDVSRTSSMQSWRPDSERPPPLPLKKPALNTSHRSNPAS
PGRAHFSQQNTNTPPPLPPQIPIYDTYMEQQAYEDYLENGFYDQQSLYRTPEPQHPARHF
TPSPNAQDRYQIPPHLSPGHSSYQPPADLPALDTNDWSHVASAYETDNMYPDHAYESPVR
MPVADAYMSPGSPSPLKTETYSPAPSQQSPLHHHSSQSSLNYMTSQSSPLTPQQCSERDL
ALRMERLDMRPAMERLEPRPMVDRIDMRPSMDIRPVDMRPTLEKRMSLPNGMPKYQPMSP
SVSPSRFNSMPNKRPVPVSAGNTPVKQLDIPEYDILSDSMRSDTAWVELDLPSIPTRPQV
DLSNVTYACPEMWSLSGVRNWIRPFFTGDKEVPEKDLHTAVSNLFAANKTMSPVYAEQYA
KHVIGALGRGDVLRHDEERGSYMFSDEGVVSGVIPALTLCYSKSSHDSGYTCYSTKCPYE
SDTRKREDKKRTESTSSDQMDWAQYWELTDDQLARIDPREIKRQYAMHELIVGEEHFIRD
LEILHNVYGESLKSHMPDKQFRDMFAVQDIIQCSKELLQGRLKARHIIFVTGIADIIIEW
IKVARPHFLAYANRYLHADRRIRKEREDNVLFSQWLGDMSKDPRTLGKPYSIYFHRVIPR
LARYSLLLGTISKHTTNEMELELLSRAVAECDDVTRQCNMVIGNVEKQVELLDLKSQFVF
KPDCGADLKLESTQRKIMRRGDVQRKSDYGFEWIDAHLVLLDNFLVLCKHQTGQHGPKLY
VTKKPIPLELLCVEQIDEAEQQTKGRIHNITSHVREVRDKRMSFIGGDHHSSSSSNPGAV
TVLNEDSDQTTYPFRIRHLGQNITYTLFCPSSLDRDRWHTAMVEAKRQYSSKVYAKNAEP
FRLTVLSYLDFGYEIPVRLAVPNNASTLQRAIEKAGMAGKPHLKTQPSSTSMTTRSKVNC
ATSFMFDSREFVFVGTDYGVFVSELSPETRHKGGNNKYKRCVDLHKVTQIGVIETLNLVI
ILCHRGLIYYHLDQLLNRSMTKDAATPMGYKLSSSASFFTIGNMKNRTLVFYKSREGLNS
VFKVLEPIRQKGSQKKRSRMSLSRFSSHIGSTEYFRDAERFYVPSECWGISVFKNYFSVH
CTKGFEAMSLDFKVPRTLPIISSGSTDLRKRLEGLRPLAMFQISDSKFMLCYDELLVYTD
HFGNLASKPIPIMIKAKAVALQHPYLVIVDDEMAEIRHIDGTLKQVIPGQDMRLLDDHEG
QIKLCMANPNIYGRQLIVELNTNELIVDDDDSSLTGL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG